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  5. Sro1543_g281120.1

Sro1543_g281120.1 (Contig1530.g13908)


Aliases : Contig1530.g13908

Description : Hypothetical protein


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1543_g281120.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Sro101_g051720.1 Contig348.g4725 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro111_g055190.1 Contig567.g7196 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro1126_g244030.1 Contig1609.g14564 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro1236_g255140.1 Contig1374.g12617 Leucine Rich Repeat 0.04 OrthoFinder
Sro1331_g263510.1 Contig1733.g15457 Leucine rich repeat N-terminal domain 0.03 OrthoFinder
Sro1460_g274600.1 Contig332.g4412 Leucine Rich Repeat 0.02 OrthoFinder
Sro1468_g275160.1 Contig3834.g29482 Leucine Rich Repeat 0.05 OrthoFinder
Sro1566_g282920.1 Contig581.g7349 LRR receptor-like serine threonine-protein kinase At4g08850 0.03 OrthoFinder
Sro1685_g291070.1 Contig3608.g27874 LRR receptor-like serine threonine-protein kinase 0.05 OrthoFinder
Sro181_g079000.1 Contig4257.g32227 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro2000_g310250.1 Contig1011.g10144 Leucine Rich Repeat 0.04 OrthoFinder
Sro2116_g315190.1 Contig1604.g14544 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro2158_g316940.1 Contig3584.g27688 Leucine Rich Repeat 0.05 OrthoFinder
Sro2223_g319710.1 Contig2179.g18196 Leucine Rich Repeat 0.03 OrthoFinder
Sro2273_g321510.1 Contig1841.g16144 Leucine Rich Repeat 0.03 OrthoFinder
Sro24_g016630.1 Contig40.g273 Leucine Rich Repeat 0.03 OrthoFinder
Sro273_g105050.1 Contig4205.g31986 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro283_g107690.1 Contig4255.g32200 LRR receptor-like serine threonine-protein kinase At4g08850 0.05 OrthoFinder
Sro321_g116720.1 Contig56.g428 Leucine Rich Repeat 0.04 OrthoFinder
Sro322_g117050.1 Contig1229.g11543 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro32_g020780.1 Contig3715.g28551 Leucine Rich Repeat 0.03 OrthoFinder
Sro32_g020790.1 Contig3715.g28552 LRR receptor-like serine threonine-protein kinase At4g08850-like 0.04 OrthoFinder
Sro32_g021020.1 Contig3715.g28575 Leucine Rich Repeat 0.03 OrthoFinder
Sro449_g145300.1 Contig3482.g27000 STYKc 0.03 OrthoFinder
Sro449_g145310.1 Contig3482.g27001 Leucine Rich Repeat 0.04 OrthoFinder
Sro45_g026870.1 Contig2311.g19069 Leucine Rich Repeat 0.02 OrthoFinder
Sro460_g147480.1 Contig3843.g29573 Leucine Rich Repeat 0.02 OrthoFinder
Sro469_g149290.1 Contig2361.g19379 Leucine Rich Repeat 0.03 OrthoFinder
Sro469_g149300.1 Contig2361.g19380 STYKc 0.04 OrthoFinder
Sro526_g160530.1 Contig842.g9298 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro52_g030880.1 Contig3190.g25171 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro52_g030930.1 Contig3190.g25176 LRR receptor-like serine threonine-protein kinase 0.02 OrthoFinder
Sro52_g030970.1 Contig3190.g25180 Leucine Rich Repeat 0.04 OrthoFinder
Sro52_g031140.1 Contig3190.g25197 Leucine Rich Repeat 0.03 OrthoFinder
Sro52_g031230.1 Contig3190.g25206 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro548_g164490.1 Contig1714.g15329 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro638_g179650.1 Contig628.g7628 Leucine Rich Repeat 0.02 OrthoFinder
Sro787_g202390.1 Contig4626.g34524 Leucine Rich Repeat 0.03 OrthoFinder
Sro837_g209110.1 Contig405.g5504 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0046677 response to antibiotic IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!