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  5. Sro1339_g264310.1

Sro1339_g264310.1 (Contig2212.g18356)


Aliases : Contig2212.g18356

Description : Hypothetical protein


Gene families : OG_01_0000985 (OrthoFinder) Phylogenetic Tree(s): OG0000985_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1339_g264310.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Sro1053_g235880.1 Contig4118.g31459 Hypothetical protein 0.04 OrthoFinder
Sro106_g236591.1 No alias Hypothetical protein 0.03 OrthoFinder
Sro1324_g262800.1 Contig3409.g26609 Hypothetical protein 0.03 OrthoFinder
Sro1339_g264320.1 Contig2212.g18357 BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro2509_g329780.1 Contig801.g8983 Hypothetical protein 0.02 OrthoFinder
Sro267_g103390.1 Contig4506.g33801 BTB/POZ domain [Interproscan]. 0.06 OrthoFinder
Sro862_g212380.1 Contig833.g9195 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0003796 lysozyme activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
MF GO:0008488 gamma-glutamyl carboxylase activity IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
BP GO:0009405 obsolete pathogenesis IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
BP GO:0016998 cell wall macromolecule catabolic process IEP Enrichment
BP GO:0017187 peptidyl-glutamic acid carboxylation IEP Enrichment
BP GO:0018200 peptidyl-glutamic acid modification IEP Enrichment
BP GO:0018214 protein carboxylation IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044036 cell wall macromolecule metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!