Heatmap: Cluster_56 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
112-1,-N,48h
112-1,-N,72h
112-1,-P,48h
112-1,-P,72h
112-1,Control,48h
112-1,Control,72h
84A,MT-,F/2,18C
84A,MT-,Maribacter sp.,F/2,18C
84A,MT-,Roseovarius sp.,F/2,18C
85A,MT+
85A,MT+,-Si,24h
85A,MT+,100nM diproline
85A,MT+,1mM H2O2
85A,MT+,50uM decadienal,0.26% MeOH
85A,MT+,ASW,F/2,72h
85A,MT+,Cold,4C
85A,MT+,Heat,30C
85A,MT+,High light,30m
85A,MT+,High light,6h
85A,MT+,High salt
85A,MT+,Low salt
85B,MT-
85B,MT-,+SIP
PONTON36/34,Crossed strains,11h
PONTON36/34,Crossed strains,14h
PONTON36/34,Crossed strains,21h
PONTON36/34,Separate strains
Sro106_g053410.1 (Contig1122.g10738)
- - 1.67 - - - - - - -0.44 - - 2.86 - -0.27 - - - - 3.68 0.85 - - - - - -1.61
Sro107_g053890.1 (Contig1548.g14064)
-6.64 -3.65 -3.5 -4.49 -4.74 -1.86 -3.95 -4.01 -1.1 -0.03 -0.16 -0.56 2.74 -1.34 -2.13 -3.34 -0.14 -4.11 -0.14 2.68 0.46 1.6 -0.83 -2.36 -1.68 0.39 -0.28
Sro1099_g241170.1 (Contig806.g9005)
-5.07 -3.27 -4.04 -4.58 -4.41 -5.53 -4.62 -5.28 -4.12 0.09 -4.96 -0.98 2.89 -3.6 -4.66 -3.48 -5.13 -6.87 -2.45 4.03 -1.13 -4.19 -4.3 -5.52 -3.99 -5.38 -4.24
Sro112_g055530.1 (Contig1575.g14278)
-0.4 - -1.74 2.05 1.01 - -5.55 -0.28 -5.49 -0.12 -4.03 0.05 3.02 -3.73 -1.5 -2.5 - -2.24 -1.19 2.51 0.08 -1.61 -4.1 - -1.47 - -4.07
Sro118_g057840.1 (Contig2714.g21854)
-0.91 0.01 -2.02 -1.76 -1.61 -0.96 -0.77 -2.13 1.52 0.48 -4.39 0.33 -0.08 0.16 -2.22 -5.02 -2.17 - - -0.94 1.35 1.31 0.97 0.12 1.59 1.18 0.4
Sro1215_g253210.1 (Contig2655.g21465)
-3.35 -3.16 -1.09 -2.86 -2.45 -4.38 -5.56 -1.76 -3.67 -0.05 -1.16 -2.77 3.74 -0.13 -2.04 -4.35 -4.4 - - 3.12 -4.01 -1.27 -4.13 -3.68 -3.73 - -4.04
Sro1264_g257360.1 (Contig827.g9171)
- -0.74 -5.15 -3.22 -2.14 -3.48 -1.58 -1.78 -4.85 0.87 1.31 0.74 1.77 1.78 0.04 -1.71 0.96 -1.49 -0.85 1.49 -0.5 -4.97 -3.37 0.17 -0.96 0.12 0.9
Sro1268_g257800.1 (Contig4283.g32368)
-3.37 -0.9 -2.68 - - - -1.32 -2.44 -0.92 -0.09 -1.4 -0.46 3.76 -2.52 -1.25 -1.95 -3.84 -3.9 - 2.77 -1.64 -2.9 -2.87 -0.78 - -1.22 -3.43
Sro1311_g261780.1 (Contig1682.g15105)
-3.64 -3.28 -3.39 - -4.61 -6.09 -0.02 -1.81 -2.13 -0.22 -1.11 -1.66 2.68 -6.39 -0.53 -0.53 -1.97 0.39 0.37 3.11 0.1 -4.21 -2.73 -0.28 -0.06 -0.46 -1.18
Sro131_g062310.1 (Contig67.g683)
-1.35 -2.98 -1.03 -2.25 -2.43 -1.57 0.54 -1.24 -0.52 0.64 0.63 1.19 0.59 -0.61 0.26 0.01 -0.01 -1.22 -1.12 1.99 0.8 -1.42 -1.78 0.95 -0.04 -0.75 0.22
Sro1339_g264310.1 (Contig2212.g18356)
- -0.72 -2.33 -1.71 - -4.03 -1.36 - - -0.06 - 1.45 3.32 -4.33 -2.47 - - -0.94 -2.02 3.05 0.68 -3.21 - -2.3 -1.22 -3.75 -3.42
Sro1442_g273090.1 (Contig3575.g27642)
- - - - - - - - - 4.75 - - - - - - - - - - - - - - - - -
Sro1451_g273860.1 (Contig4314.g32537)
- - - - - - 1.79 -2.2 -1.07 -0.64 - -1.24 2.55 - - -0.96 - - - 3.47 - - 0.08 1.05 - 0.28 -
Sro1483_g276410.1 (Contig969.g9916)
-5.8 -3.48 -3.71 - -5.81 - -5.48 -3.26 -2.58 -0.53 -4.02 -4.51 2.94 -3.97 -4.18 -5.73 - 0.85 0.69 3.84 -5.45 -4.8 -5.45 -6.59 -6.65 - -5.88
Sro1538_g280800.1 (Contig2921.g23246)
- - - - - -4.6 -4.07 - - -0.09 -3.03 -2.78 2.47 - -6.43 -2.28 - - -2.66 4.28 -2.79 - -5.36 - - - -2.67
Sro154_g070130.1 (Contig2716.g21891)
-1.5 -1.46 - - -1.51 - -4.45 0.9 -0.48 0.2 - 0.13 3.4 -2.27 -4.87 - -3.0 - - 3.11 -0.35 -0.53 -4.45 - - - -
Sro162_g072840.1 (Contig2670.g21620)
- -1.37 -1.99 -2.4 -3.44 - -6.1 - - -0.8 - - 3.74 - - -3.98 - -5.0 -4.99 3.58 -5.04 - - - - - -
Sro1711_g292860.1 (Contig3721.g28604)
-5.19 -2.08 -2.85 -1.57 -1.55 -1.38 -2.07 -0.72 -1.39 0.31 1.72 -0.2 1.76 0.89 0.11 -0.93 0.67 -1.06 -0.32 2.41 -1.35 -2.26 -2.23 -1.25 -2.03 -0.97 0.92
Sro177_g077890.1 (Contig795.g8915)
-3.29 -0.76 -0.93 -2.26 -1.85 -4.76 -2.03 -1.97 -2.15 -0.02 0.09 -2.14 2.52 -4.44 -1.0 -1.2 -1.09 -1.28 -1.11 3.67 -1.23 -1.44 -2.82 -4.15 - -3.34 -1.22
Sro1971_g308580.1 (Contig1202.g11322)
- -0.07 - - - - - - - 0.11 0.28 - 3.38 - - - - - - 3.61 0.12 - - - - - -
Sro2131_g315870.1 (Contig2224.g18463)
- - - -0.05 - - - - - -0.63 - -1.74 3.26 - -1.88 - - -0.07 -0.76 3.55 0.24 -1.79 - - - - -1.18
Sro225_g091780.1 (Contig1661.g14976)
- -3.93 -2.45 -1.73 -2.09 - -2.53 -1.06 0.76 -0.35 -4.74 -2.52 3.61 -1.96 -2.28 -0.7 -1.22 -2.68 -5.34 2.88 -1.0 -0.43 -3.01 -5.45 -4.52 -3.41 -3.34
Sro226_g091960.1 (Contig565.g7168)
-4.29 -1.42 -1.74 -3.07 -2.05 -1.19 -1.57 -0.5 -1.38 0.26 1.01 -0.66 1.47 -1.73 0.16 0.72 0.21 -0.6 -0.81 3.11 -0.47 -2.22 -1.15 -3.48 -2.12 -2.49 0.55
Sro23_g015950.1 (Contig2259.g18745)
-2.06 -2.39 -1.48 -2.11 -2.63 -1.44 -0.43 -1.22 -0.5 0.57 -0.14 1.09 1.67 -0.57 -0.65 -0.74 -0.73 -2.02 0.78 2.71 0.27 -2.09 -1.87 -0.04 -0.68 -1.63 0.27
Sro2513_g329860.1 (Contig2220.g18454)
-5.86 -1.17 -3.72 -1.48 -1.8 -2.18 -1.3 -3.26 -2.9 -0.07 -1.62 -0.9 2.66 -0.91 -1.08 -0.57 -0.92 -1.3 -1.83 3.53 0.35 -3.19 -2.85 -2.11 -5.71 -2.77 -1.14
Sro2533_g330460.1 (Contig379.g5092)
-4.12 -3.46 -1.75 -1.72 -2.34 -0.15 -0.54 -3.52 -3.72 0.24 -0.75 -0.38 1.74 -1.29 -0.32 -0.21 -1.7 -0.97 0.62 3.61 -0.33 -7.12 -5.59 -2.2 -6.64 -2.61 -0.9
Sro274_g105420.1 (Contig1557.g14166)
- - - - -0.07 - -0.12 - -1.59 0.53 - - 3.37 -1.8 -1.49 - 0.44 - - 2.08 2.18 0.48 -4.04 - -1.91 -1.27 -3.2
Sro277_g106280.1 (Contig444.g5966)
- 0.07 - - -0.13 - - - - -0.16 - - 4.45 -0.41 - - - - - - -1.28 -0.13 -2.39 - - - -
- - - - - - -2.14 - - -0.49 -0.99 - 3.34 - -2.86 -4.99 - - -1.32 3.79 -4.86 - - -3.33 -1.51 - -0.71
Sro284_g108000.1 (Contig177.g2087)
- - - - - - - - - - - - - - - - - - - - - - - - - - -
Sro2905_g339950.1 (Contig4645.g34608)
- - - - - - - - - - - - - - - - - - - - 4.75 - - - - - -
Sro3299_g346400.1 (Contig3585.g27695)
-1.9 -1.12 -0.65 - - -1.34 - -3.54 - 0.03 - -0.25 2.62 - -0.9 - -1.36 -2.43 - 3.73 0.08 - - - -0.13 - -0.42
Sro32_g020900.1 (Contig3715.g28563)
-4.19 0.34 0.43 0.42 0.14 -1.99 -1.17 -3.23 -1.93 0.42 -1.45 -0.01 2.1 -2.17 -1.28 -1.23 -2.13 -2.83 -0.98 2.8 0.08 -0.5 -2.59 -0.74 -0.57 -0.27 -0.14
Sro3457_g348210.1 (Contig1352.g12479)
- - - - - - - - - - - - - - - - - - - - - - - - - - -
Sro348_g123120.1 (Contig2346.g19278)
-1.99 - - - - - -3.58 - - -1.01 - - 3.91 - -3.23 - - - - 3.33 - -1.03 - -1.31 - - -4.13
Sro349_g123610.1 (Contig1280.g11977)
-3.49 -2.79 - -4.09 - - -2.91 -4.04 - 0.46 -3.55 -0.2 2.7 -3.1 -2.92 -5.35 -3.05 -3.74 -5.85 4.04 -0.67 - -4.7 -3.95 - - -5.1
Sro3962_g352220.1 (Contig1123.g10766)
- 0.87 -1.1 -0.48 -1.67 1.37 -1.01 0.39 0.96 -0.2 -0.22 -0.61 1.55 - 0.0 0.36 -0.19 - -3.52 1.46 -0.06 0.73 -0.17 -0.17 -1.14 -1.11 -0.47
Sro3_g002900.1 (Contig3832.g29475)
- - -0.26 - - - - - - 0.38 -1.14 1.17 3.47 - - -2.77 -2.76 -0.21 -1.78 3.04 0.29 - - - - - -2.51
- - - - 2.98 - - 1.66 0.35 1.3 - 0.41 - - 0.68 - -1.62 1.41 - - - - 2.06 - - - 1.08
Sro451_g145690.1 (Contig1599.g14513)
-6.2 1.12 0.36 -0.17 -0.47 -0.44 -3.85 -1.75 -1.48 -0.46 -2.4 -3.09 2.67 -1.1 -2.37 -6.65 -1.71 -6.78 -6.68 3.41 -1.08 -1.01 -3.1 - -4.47 -2.67 -3.17
- - -1.54 - -1.43 -2.91 - - -2.67 -0.6 -0.12 - 3.83 - -3.36 - - - - 3.26 -3.9 -1.39 -5.76 - - - -5.06
Sro481_g151620.1 (Contig3107.g24720)
2.2 - - - - - - - - -0.91 - - 3.15 - -3.59 - - - - 3.69 - - - - - - -
Sro484_g152330.1 (Contig2684.g21704)
- - - - - - - -0.93 - 0.54 - 0.09 3.87 - -1.61 - - - - 1.26 0.14 2.25 -1.15 - - - -1.8
Sro506_g156380.1 (Contig3494.g27115)
-5.06 1.08 0.28 -0.48 -0.78 -1.29 -0.75 -0.02 -0.61 -0.19 -0.81 -0.28 2.0 -0.95 -0.22 -1.43 -0.17 -1.95 -2.25 1.36 0.8 0.43 0.2 -0.16 0.41 -0.38 -0.99
Sro509_g157000.1 (Contig4289.g32393)
- 0.55 -1.62 - - - -4.13 -2.13 -1.83 0.22 - -1.38 2.95 - -0.81 - - -0.28 -1.19 3.38 -0.31 -0.02 -0.94 -1.47 -3.12 -1.48 -
Sro553_g165310.1 (Contig1023.g10207)
-2.26 - - - - - 0.95 -2.04 - -2.17 - - 3.29 - -2.12 - - -0.95 0.18 3.32 -2.15 -1.72 - - 0.56 -2.41 -0.98
Sro562_g166930.1 (Contig149.g1645)
-6.98 -1.75 -4.34 -5.15 -4.53 -3.76 -2.83 -3.16 -2.2 -0.11 -1.66 -1.12 2.19 -1.44 -1.65 -1.11 -2.72 -0.75 -0.78 3.98 -0.69 -3.91 -4.39 -2.06 -4.23 -2.21 -1.77
- - - - - - - - - 3.69 - - - - 3.82 - - - - - - - - - - - -
Sro592_g172120.1 (Contig2562.g20814)
-2.22 -0.42 0.38 -2.18 -1.64 -1.81 -0.68 -0.17 -0.69 -0.1 0.12 -1.48 2.71 -1.2 0.27 -0.13 0.15 -0.77 -0.37 1.84 -0.06 -0.4 -0.58 -1.44 -1.63 -2.52 -0.0
- 1.45 - 1.42 - - - - - -0.25 2.57 1.34 2.61 - 0.09 - -0.09 - - 0.27 - - - - - 0.02 0.96
Sro62_g035610.1 (Contig2718.g21942)
- -3.26 -2.79 -2.18 - - -4.63 - - -1.08 -3.07 - 4.08 - - - - - -4.56 3.11 -1.66 - -6.93 - - - -
Sro639_g179760.1 (Contig197.g2297)
- - - - - - - - - - - - - - - - - - - - - - - - - - -
Sro66_g037350.1 (Contig399.g5405)
-4.37 -1.1 -2.06 -2.08 -3.1 -1.98 -0.32 -0.86 -2.11 0.23 -0.09 -0.31 2.41 -0.69 -0.1 -0.17 -0.6 -0.29 -0.78 2.46 0.12 -1.31 -2.74 -0.0 0.05 -0.72 0.62
Sro67_g037510.1 (Contig495.g6667)
- -1.22 -0.26 -1.85 - - -5.69 - - -0.03 -1.07 -4.62 3.71 -2.42 -3.46 - - -1.7 1.01 2.98 - -5.63 -2.71 - -1.98 - -
- - -0.47 -1.43 -0.72 -2.64 -4.82 -2.53 -0.83 -0.82 - - 3.45 -1.89 -2.73 -3.7 - -0.46 -1.51 3.12 -0.64 -2.64 -2.54 -2.83 0.51 - -4.02
Sro69_g038400.1 (Contig4677.g34749)
- -2.84 -2.88 -4.63 -2.09 -0.99 -1.42 -2.47 -4.22 0.13 -0.45 -0.86 2.26 -1.93 -0.31 -0.56 -1.52 -1.12 -1.31 3.7 -0.14 -2.73 -5.6 -2.52 -2.97 -2.18 -0.62
Sro701_g189850.1 (Contig2013.g17196)
- - - - - - -2.59 -1.56 -2.38 1.39 - - 3.93 -0.64 -2.35 0.65 - -1.43 -0.33 1.52 0.48 -1.06 -3.46 - - - -
Sro72_g039990.1 (Contig1459.g13398)
-2.72 -0.52 -1.75 -0.68 -1.9 -3.12 -0.47 -5.38 -3.64 0.96 -0.41 0.78 2.67 0.23 -0.43 0.35 -4.16 -3.24 -2.19 2.36 1.25 -1.51 -4.5 -4.14 -1.15 -0.11 -1.71
Sro781_g201610.1 (Contig678.g7944)
- -0.03 - -0.18 -0.23 -1.25 -3.43 -3.45 -2.41 -0.02 - -0.43 3.55 - -2.26 - - -0.07 -0.72 2.98 - -2.99 -3.13 - - - -3.11
Sro870_g213590.1 (Contig1807.g15929)
-3.77 -2.21 -2.89 -3.51 -4.8 - -1.62 -6.16 -2.42 -0.13 -2.47 -0.53 3.15 -4.54 -4.72 -3.86 - -3.96 -4.86 3.73 0.12 -3.67 -4.23 -2.73 -2.87 -2.38 -4.88
- - - - - - - - - - - - - - - - - - - - - - - - - - -
Sro9_g007480.1 (Contig4120.g31516)
-3.23 -0.18 -1.14 -1.59 -1.55 -3.23 -1.65 -1.32 -2.23 0.34 0.29 -0.55 2.77 -0.77 -0.52 -0.6 -1.1 -0.62 -0.4 2.83 -2.38 -0.74 -1.05 -1.8 -2.65 -1.14 -0.46

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.