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  5. Sro1326_g263050.1

Sro1326_g263050.1 (Contig231.g2780)


Aliases : Contig231.g2780

Description : Putative fatty-acid--CoA ligase FadD21


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1326_g263050.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Sro1208_g252550.1 Contig2577.g20928 MSMEG_5435/MSMEI_5285 0.04 OrthoFinder
Sro1385_g268210.1 Contig774.g8719 AMP-dependent synthetase/ligase [Interproscan]. 0.05 OrthoFinder
Sro1444_g273230.1 Contig2917.g23215 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder
Sro14_g010770.1 Contig1128.g10826 D-alanine--D-alanyl carrier protein ligase 0.02 OrthoFinder
Sro1674_g290330.1 Contig3489.g27080 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder
Sro1753_g295420.1 Contig4414.g33155 D-alanine--D-alanyl carrier protein ligase 0.08 OrthoFinder
Sro1903_g304510.1 Contig4361.g32858 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder
Sro193_g082620.1 Contig826.g9161 Hypothetical protein 0.06 OrthoFinder
Sro329_g118810.1 Contig2017.g17251 Disco-interacting protein 2 homolog A 0.02 OrthoFinder
Sro329_g118830.1 Contig2017.g17253 D-alanine--D-alanyl carrier protein ligase 0.05 OrthoFinder
Sro613_g175560.1 Contig1327.g12246 D-alanine--D-alanyl carrier protein ligase 0.02 OrthoFinder
Sro613_g175590.1 Contig1327.g12249 Hypothetical protein 0.05 OrthoFinder
Sro962_g225060.1 Contig891.g9474 D-alanine--D-alanyl carrier protein ligase 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 40 207
IPR000873 AMP-dep_Synth/Lig 250 367
No external refs found!