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  5. Sro1229_g254440.1

Sro1229_g254440.1 (Contig3654.g28208)


Aliases : Contig3654.g28208

Description : Gamma-aminobutyric acid (GABA) B receptor


Gene families : OG_01_0000254 (OrthoFinder) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1229_g254440.1
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
Sro1055_g236080.1 Contig2523.g20596 Gamma-aminobutyric acid (GABA) B receptor 0.06 OrthoFinder
Sro1124_g243790.1 Contig4358.g32837 Gamma-aminobutyric acid (GABA) B receptor 0.06 OrthoFinder
Sro1272_g258200.1 Contig3783.g29037 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro141_g065900.1 Contig65.g614 Acid type B receptor subunit 2 0.03 OrthoFinder
Sro1469_g275290.1 Contig3798.g29130 Metabotropic glutamate receptor 6 0.03 OrthoFinder
Sro1650_g288710.1 Contig3263.g25713 Gamma-aminobutyric acid (GABA) B receptor 0.09 OrthoFinder
Sro1724_g293730.1 Contig1866.g16322 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro1778_g296990.1 Contig1025.g10228 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro177_g077840.2 No alias GPCR family 3, C-terminal [Interproscan]. 0.06 OrthoFinder
Sro1815_g299430.2 No alias Receptor, ligand binding region [Interproscan]. 0.02 OrthoFinder
Sro257_g100950.1 Contig2018.g17274 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro295_g110530.1 Contig4342.g32776 Gamma-aminobutyric acid (GABA) B receptor 0.06 OrthoFinder
Sro2963_g341030.1 Contig4386.g32971 Receptor, ligand binding region [Interproscan]. 0.03 OrthoFinder
Sro768_g199680.1 Contig2130.g17973 Gamma-aminobutyric acid (GABA) B receptor 0.04 OrthoFinder
Sro7_g006290.1 Contig389.g5282 Receptor 0.03 OrthoFinder
Sro923_g220670.1 Contig4194.g31935 Acid type B receptor subunit 2 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004930 G protein-coupled receptor activity IEA Interproscan
BP GO:0007186 G protein-coupled receptor signaling pathway IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
InterPro domains Description Start Stop
IPR001828 ANF_lig-bd_rcpt 247 548
IPR017978 GPCR_3_C 634 884
No external refs found!