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  5. Sro1209_g252680.1

Sro1209_g252680.1 (Contig2883.g23020)


Aliases : Contig2883.g23020

Description : Ammonium transporter 1 member


Gene families : OG_01_0000094 (OrthoFinder) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1209_g252680.1
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001496.4 tig00001496_g9204.t1 Solute transport.channels.AMT family.ammonium... 0.01 OrthoFinder
Cpa|evm.model.tig00020603.39 tig00020603_g11770.t1 Solute transport.channels.AMT family.ammonium... 0.01 OrthoFinder
Dusal.0331s00012.1 33192982 Ammonium transporter AmtB-like domain [Interproscan]. 0.02 OrthoFinder
EOD36839 No alias Putative ammonium transporter [Ensembl]. 0.01 OrthoFinder
PTI_10G00390.1 No alias Ammonium transporter AmtB-like domain [Interproscan]. 0.02 OrthoFinder
PTI_11G00420.1 No alias Ammonium transporter AmtB-like domain [Interproscan]. 0.03 OrthoFinder
Sro1209_g252670.1 Contig2883.g23019 Ammonium transporter 1 member 0.03 OrthoFinder
Sro2154_g316820.1 Contig2084.g17769 Ammonium transporter 1 member 0.03 OrthoFinder
Sro4021_g352560.1 Contig3046.g24242 Ammonium transporter 1 member 0.04 OrthoFinder
Sro565_g167600.1 Contig2465.g20185 Ammonium transporter 1 member 0.06 OrthoFinder
TP09G01360.1 No alias Ammonium transporter AmtB-like domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA Interproscan
BP GO:0015696 ammonium transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 46 470
No external refs found!