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  5. Sro1203_g252100.2

Sro1203_g252100.2


Description : Hypothetical protein


Gene families : OG_01_0003161 (OrthoFinder) Phylogenetic Tree(s): OG0003161_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1203_g252100.2
Cluster HCCA: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001229.4 tig00001229_g7837.t1 RNA processing.messenger ribonucleoprotein particle... 0.01 OrthoFinder
Cz16g01080.t1 No alias THO complex, subunit THOC1 [Interproscan]. 0.01 OrthoFinder
Dusal.0044s00012.1 33194923 THO complex, subunit THOC1 [Interproscan]. 0.01 OrthoFinder
Sro1203_g252100.1 Contig3938.g30204 THO complex 0.06 OrthoFinder
TP13G03140.1 No alias THO complex, subunit THOC1 [Interproscan]. 0.03 OrthoFinder
Transcript_contig_59951 59951 THO complex, subunit THOC1 [Interproscan]. 0.01 OrthoFinder
XM_002505833.1 MICPUN_88394, 88394 THO complex, subunit THOC1 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment

No InterPro domains available for this sequence

No external refs found!