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  5. Sro1060_g236670.1

Sro1060_g236670.1 (Contig1660.g14960)


Aliases : Contig1660.g14960

Description : Sensor kinase/phosphatase LuxQ


Gene families : OG_01_0001328 (OrthoFinder) Phylogenetic Tree(s): OG0001328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1060_g236670.1
Cluster HCCA: Cluster_258

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020629.120 tig00020629_g12446.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.01 OrthoFinder
PTI_29G00910.1 No alias Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
Sro112_g055500.1 Contig1575.g14275 Sensor kinase/phosphatase LuxQ 0.02 OrthoFinder
Sro1705_g292400.1 Contig4149.g31668 Hypothetical protein 0.02 OrthoFinder
Sro1725_g293770.1 Contig690.g8080 Sensor kinase/phosphatase LuxQ 0.03 OrthoFinder
Sro2188_g318220.1 Contig1334.g12296 Sensor kinase/phosphatase LuxQ 0.03 OrthoFinder
Sro2335_g323820.1 Contig3717.g28592 Autoinducer 1 sensor kinase/phosphatase LuxN 0.02 OrthoFinder
Sro2832_g338120.1 Contig3164.g25059 Sensor protein kinase WalK (Fragment) 0.01 OrthoFinder
Sro363_g126940.1 Contig698.g8133 Sensor kinase/phosphatase LuxQ 0.07 OrthoFinder
Sro498_g154870.1 Contig3753.g28741 Hybrid signal transduction histidine kinase K 0.04 OrthoFinder
Sro60_g034610.1 Contig797.g8938 Sensor kinase/phosphatase LuxQ 0.03 OrthoFinder
Sro915_g219740.1 Contig3226.g25524 Sensor kinase/phosphatase LuxQ 0.04 OrthoFinder
Sro96_g049610.1 Contig3763.g28887 Respiration control sensor protein ArcB 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 689 813
IPR001789 Sig_transdc_resp-reg_receiver 886 999
No external refs found!