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  5. Sro1055_g236080.1

Sro1055_g236080.1 (Contig2523.g20596)


Aliases : Contig2523.g20596

Description : Gamma-aminobutyric acid (GABA) B receptor


Gene families : OG_01_0000254 (OrthoFinder) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1055_g236080.1
Cluster HCCA: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
Sro1124_g243790.1 Contig4358.g32837 Gamma-aminobutyric acid (GABA) B receptor 0.06 OrthoFinder
Sro1229_g254440.1 Contig3654.g28208 Gamma-aminobutyric acid (GABA) B receptor 0.06 OrthoFinder
Sro1724_g293730.1 Contig1866.g16322 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro1815_g299430.1 Contig740.g8480 Receptor, ligand binding region; GPCR family 3,... 0.04 OrthoFinder
Sro257_g100950.1 Contig2018.g17274 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder
Sro2963_g341030.1 Contig4386.g32971 Receptor, ligand binding region [Interproscan]. 0.06 OrthoFinder
Sro768_g199680.1 Contig2130.g17973 Gamma-aminobutyric acid (GABA) B receptor 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004930 G protein-coupled receptor activity IEA Interproscan
BP GO:0007186 G protein-coupled receptor signaling pathway IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR017978 GPCR_3_C 497 744
IPR001828 ANF_lig-bd_rcpt 88 408
No external refs found!