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  5. lcl|VRMN01000004.1_cds_KAA8494675.1_3205

lcl|VRMN01000004.1_cds_KAA8494675.1_3205 (KAA8494675)


Aliases : KAA8494675

Description : Proteasome subunit beta type-1


Gene families : OG_01_0002875 (OrthoFinder) Phylogenetic Tree(s): OG0002875_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000004.1_cds_KAA8494675.1_3205
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001339.5 tig00001339_g8261.t1 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder
Cre26.g756797 30778304 Protein degradation.26S proteasome.20S core... 0.07 OrthoFinder
Cz09g32010.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
EOD11720 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.03 OrthoFinder
EOD17403 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.03 OrthoFinder
OT_08G04050.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
PTI_00G00010.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.06 OrthoFinder
Sro1228_g254360.1 Contig2695.g21737 Proteasome subunit beta type-1 0.05 OrthoFinder
Sro335_g119990.1 Contig3868.g29756 Proteasome subunit beta type-1 0.1 OrthoFinder
TP01G00130.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
XM_002501730.1 MICPUN_81202, 81202 Proteasome, subunit alpha/beta [Interproscan]. 0.04 OrthoFinder
XM_003058479.1 MicpuC2_17183, 17183 Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002663.1_cds_GFH24902.1_19379 HaLaN_22779, GFH24902 Proteasome, subunit alpha/beta [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 63 246
No external refs found!