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  5. PTI_02G00250.1

PTI_02G00250.1


Description : ABC transporter type 1, transmembrane domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_02G00250.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.84 tig00000158_g10189.t1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Vocar.0015s0182.1 32898823 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
Vocar.0026s0119.1 32892596 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004888 transmembrane signaling receptor activity IEP Enrichment
MF GO:0004930 G protein-coupled receptor activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005615 extracellular space IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0019211 phosphatase activator activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
MF GO:0038023 signaling receptor activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
MF GO:0060089 molecular transducer activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 555 690
IPR011527 ABC1_TM_dom 831 1115
IPR011527 ABC1_TM_dom 175 438
IPR003439 ABC_transporter-like_ATP-bd 1192 1343
No external refs found!