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  5. PTI_01G11780.1

PTI_01G11780.1


Description : SET domain; AWS domain [Interproscan].


Gene families : OG_01_0000051 (OrthoFinder) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G11780.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020710.90 tig00020710_g13355.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00020710.92 tig00020710_g13356.t1 No description available 0.02 OrthoFinder
Cre03.g197700 30788134 Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.03 OrthoFinder
Cre17.g746247 30782096 Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder
Cz02g21310.t1 No alias PWWP domain; PHD-finger; FY-rich, N-terminal; FY-rich,... 0.05 OrthoFinder
Cz07g29070.t1 No alias AWS domain; SET domain; Zinc finger, GATA-type [Interproscan]. 0.02 OrthoFinder
Cz14g21060.t1 No alias SET domain [Interproscan]. 0.01 OrthoFinder
Dusal.0025s00024.1 33200721 FY-rich, C-terminal; Zinc finger, PHD-finger; FY-rich,... 0.01 OrthoFinder
EOD24560 No alias SET domain [Interproscan]. 0.01 OrthoFinder
OT_13G03070.1 No alias AWS domain; SET domain [Interproscan]. 0.05 OrthoFinder
Sro117_g057370.1 Contig3937.g30181 36 and H4 lysine-20 specific 0.02 OrthoFinder
Sro72_g039840.1 Contig1459.g13383 36 and H4 lysine-20 specific 0.06 OrthoFinder
Sro84_g045070.1 Contig220.g2640 36 and H4 lysine-20 specific 0.04 OrthoFinder
Transcript_contig_59962 59962 SET domain [Interproscan]. 0.01 OrthoFinder
Vocar.0044s0031.1 32896567 Zinc finger, CW-type; SET domain; AWS domain [Interproscan]. 0.01 OrthoFinder
XM_002502643.1 MICPUN_58938, 58938 Set domain protein 0.04 OrthoFinder
XM_002502882.1 MICPUN_83006, 83006 Set domain protein 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60593.1_4707 PRW60593 Histone-lysine N-methyltransferase ASHH2 0.03 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57331.1_9054 PRW57331 Microtubule-associated futsch isoform X1 0.02 OrthoFinder
lcl|LHPG02000010.1_cds_PRW51115.1_1157 PRW51115 Histone-lysine N-methyltransferase 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8500022.1_8975 KAA8500022 Histone-lysine N-methyltransferase ASHH2 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495732.1_1730 KAA8495732 Histone-lysine N-methyltransferase, H3 lysine-36 and H4... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0003964 RNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR006560 AWS_dom 138 173
IPR001214 SET_dom 188 295
No external refs found!