OT_08G00560.1

Description : Ribonucleotide reductase small subunit family [Interproscan].

Gene families : OG_01_0000968 (OrthoFinder) Phylogenetic Tree(s): OG0000968_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: OT_08G00560.1
Cluster	HCCA: Cluster_68

Target	Alias	Description	ECC score	Gene Family Method
Cre12.g491050	30792193, RIR2	Nucleotide metabolism.deoxynucleotide...	0.06	OrthoFinder
Cz02g24230.t1	No alias	Ribonucleotide reductase small subunit family [Interproscan].	0.07	OrthoFinder
Dusal.0106s00020.1	33193472	Ribonucleotide reductase small subunit family [Interproscan].	0.07	OrthoFinder
Dusal.0106s00021.1	33193497	Ribonucleotide reductase small subunit family [Interproscan].	0.03	OrthoFinder
EOD10158	No alias	Ribonucleotide reductase small subunit family [Interproscan].	0.07	OrthoFinder
PTI_19G00790.1	No alias	Ribonucleotide reductase small subunit family [Interproscan].	0.09	OrthoFinder
Sro151_g069180.1	Contig294.g3844	Ribonucleoside-diphosphate reductase small chain	0.02	OrthoFinder
SymbC1.scaffold2286.5	2286.5	Alkyl hydroperoxide reductase subunit C/ Thiol specific...	0.02	OrthoFinder
TP03G00660.1	No alias	Ribonucleotide reductase small subunit family [Interproscan].	0.03	OrthoFinder
TP10G02960.1	No alias	Ribonucleotide reductase small subunit family [Interproscan].	0.07	OrthoFinder
Vocar.0031s0098.1	32890123	Ribonucleotide reductase small subunit family [Interproscan].	0.03	OrthoFinder
XM_002503333.1	MICPUN_94589, 94589	Ribonucleotide reductase small subunit family [Interproscan].	0.08	OrthoFinder
XM_003058319.1	MicpuC2_33344, 33344	Ribonucleotide reductase small subunit family [Interproscan].	0.04	OrthoFinder
lcl\|LHPG02000006.1_cds_PRW58060.1_8527	PRW58060	Ribonucleoside-diphosphate reductase small chain isoform A	0.09	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8498304.1_7257	KAA8498304	Ribonucleoside-diphosphate reductase small chain	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009262	deoxyribonucleotide metabolic process	None	Extended
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Enrichment
BP	GO:0000723	telomere maintenance	IEP	Enrichment
CC	GO:0000796	condensin complex	IEP	Enrichment
MF	GO:0003674	molecular_function	IEP	Enrichment
MF	GO:0003677	DNA binding	IEP	Enrichment
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0003777	microtubule motor activity	IEP	Enrichment
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Enrichment
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	Enrichment
MF	GO:0004340	glucokinase activity	IEP	Enrichment
MF	GO:0004396	hexokinase activity	IEP	Enrichment
MF	GO:0004556	alpha-amylase activity	IEP	Enrichment
MF	GO:0004672	protein kinase activity	IEP	Enrichment
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Enrichment
MF	GO:0004797	thymidine kinase activity	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
MF	GO:0005507	copper ion binding	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
MF	GO:0005536	glucose binding	IEP	Enrichment
CC	GO:0005694	chromosome	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006260	DNA replication	IEP	Enrichment
BP	GO:0006284	base-excision repair	IEP	Enrichment
BP	GO:0006323	DNA packaging	IEP	Enrichment
BP	GO:0006464	cellular protein modification process	IEP	Enrichment
BP	GO:0006468	protein phosphorylation	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
BP	GO:0007017	microtubule-based process	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
BP	GO:0007076	mitotic chromosome condensation	IEP	Enrichment
MF	GO:0008017	microtubule binding	IEP	Enrichment
MF	GO:0008092	cytoskeletal protein binding	IEP	Enrichment
BP	GO:0009187	cyclic nucleotide metabolic process	IEP	Enrichment
BP	GO:0009190	cyclic nucleotide biosynthetic process	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
BP	GO:0016043	cellular component organization	IEP	Enrichment
MF	GO:0016160	amylase activity	IEP	Enrichment
MF	GO:0016301	kinase activity	IEP	Enrichment
BP	GO:0016310	phosphorylation	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Enrichment
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Enrichment
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Enrichment
MF	GO:0016740	transferase activity	IEP	Enrichment
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0019136	deoxynucleoside kinase activity	IEP	Enrichment
MF	GO:0019200	carbohydrate kinase activity	IEP	Enrichment
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Enrichment
MF	GO:0019206	nucleoside kinase activity	IEP	Enrichment
MF	GO:0019207	kinase regulator activity	IEP	Enrichment
MF	GO:0019887	protein kinase regulator activity	IEP	Enrichment
BP	GO:0022402	cell cycle process	IEP	Enrichment
BP	GO:0030261	chromosome condensation	IEP	Enrichment
MF	GO:0030554	adenyl nucleotide binding	IEP	Enrichment
BP	GO:0032200	telomere organization	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
MF	GO:0036094	small molecule binding	IEP	Enrichment
BP	GO:0036211	protein modification process	IEP	Enrichment
MF	GO:0042162	telomeric DNA binding	IEP	Enrichment
MF	GO:0043047	single-stranded telomeric DNA binding	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043168	anion binding	IEP	Enrichment
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Enrichment
CC	GO:0044815	DNA packaging complex	IEP	Enrichment
MF	GO:0048029	monosaccharide binding	IEP	Enrichment
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Enrichment
BP	GO:0051276	chromosome organization	IEP	Enrichment
BP	GO:0060249	anatomical structure homeostasis	IEP	Enrichment
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Enrichment
BP	GO:0071103	DNA conformation change	IEP	Enrichment
BP	GO:0071840	cellular component organization or biogenesis	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment
MF	GO:0098847	sequence-specific single stranded DNA binding	IEP	Enrichment
MF	GO:1901265	nucleoside phosphate binding	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment
BP	GO:1903047	mitotic cell cycle process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000358	RNR_small_fam	17	283

External Links

No external refs found!

OT_08G00560.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation