Aliases : HaLaN_07851, GFH12211
Description : Signal transduction histidine kinase, dimerisation/phosphoacceptor domain; Histidine kinase/HSP90-like ATPase; Archaeal/bacterial/fungal rhodopsins [Interproscan].
Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|BLLF01000478.1_cds_GFH12211.1_6688 | |
Cluster | HCCA: Cluster_52 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000042.236 | tig00000042_g15634.t1 | Probable histidine kinase 3 OS=Oryza sativa subsp. indica | 0.03 | OrthoFinder | |
Cpa|evm.model.tig00000190.17 | tig00000190_g13838.t1 | Probable histidine kinase 3 OS=Oryza sativa subsp. indica | 0.03 | OrthoFinder | |
Cpa|evm.model.tig00000237.35 | tig00000237_g20484.t1 | Histidine kinase 5 OS=Arabidopsis thaliana | 0.01 | OrthoFinder | |
Cpa|evm.model.tig00000640.11 | tig00000640_g2766.t1 | Probable histidine kinase 4 OS=Oryza sativa subsp. japonica | 0.03 | OrthoFinder | |
Cpa|evm.model.tig00020610.13 | tig00020610_g11951.t1 | Histidine kinase 2 OS=Arabidopsis thaliana | 0.01 | OrthoFinder | |
Cpa|evm.model.tig00020710.84 | tig00020710_g13337.t1 | Probable histidine kinase 4 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder | |
Cpa|evm.model.tig00020943.57 | tig00020943_g16300.t1 | Ethylene receptor OS=Malus domestica | 0.01 | OrthoFinder | |
Cpa|evm.model.tig00020965.42 | tig00021501_g21945.t1 | Histidine kinase 3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cre16.g678900 | 30778058 | No description available | 0.05 | OrthoFinder | |
Dusal.0212s00008.1 | 33202594 | Signal transduction response regulator, receiver domain;... | 0.02 | OrthoFinder | |
Dusal.0319s00003.1 | 33201934 | Archaeal/bacterial/fungal rhodopsins; Histidine... | 0.02 | OrthoFinder | |
Dusal.0607s00010.1 | 33187794 | Signal transduction response regulator, receiver domain... | 0.02 | OrthoFinder | |
Sro508_g156640.1 | Contig2824.g22619 | Hybrid signal transduction histidine kinase K | 0.02 | OrthoFinder | |
SymbC1.scaffold39.189 | 39.189 | FecR protein; Signal transduction histidine kinase,... | 0.01 | OrthoFinder | |
XM_002503097.1 | MICPUN_74145, 74145 | Signal transduction response regulator, receiver domain... | 0.02 | OrthoFinder | |
XM_003057224.1 | MicpuC2_8975, 8975 | Signal transduction response regulator, receiver domain... | 0.04 | OrthoFinder | |
XM_003057225.1 | MicpuC2_10763, 10763 | Signal transduction histidine kinase,... | 0.04 | OrthoFinder | |
XM_003060856.1 | MicpuC2_20059, 20059 | Signal transduction response regulator, receiver domain... | 0.02 | OrthoFinder | |
XM_003062956.1 | MicpuC2_21996, 21996 | Signal transduction histidine kinase,... | 0.01 | OrthoFinder | |
XM_003064490.1 | MicpuC2_10373, 10373 | Signal transduction response regulator, receiver domain;... | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEA | Interproscan |
MF | GO:0005216 | ion channel activity | IEA | Interproscan |
BP | GO:0006811 | ion transport | IEA | Interproscan |
BP | GO:0007165 | signal transduction | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Enrichment |
BP | GO:0006793 | phosphorus metabolic process | IEP | Enrichment |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
BP | GO:0009117 | nucleotide metabolic process | IEP | Enrichment |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0009187 | cyclic nucleotide metabolic process | IEP | Enrichment |
BP | GO:0009190 | cyclic nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
BP | GO:0019637 | organophosphate metabolic process | IEP | Enrichment |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | Enrichment |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
No external refs found! |