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  5. Cpa|evm.model.tig00021348.58

Cpa|evm.model.tig00021348.58 (tig00021348_g20561.t1)


Aliases : tig00021348_g20561.t1

Description : Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana


Gene families : OG_01_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021348.58
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021319.15 tig00021319_g20210.t1 No description available 0.04 OrthoFinder
Cre01.g003751 30789533 No description available 0.02 OrthoFinder
Cre12.g553450 30793567, CNG1 Potassium channel AKT2/3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre17.g706900 30782036, CNG3 Solute transport.channels.VIC superfamily.voltage-gated... 0.02 OrthoFinder
OT_13G00610.1 No alias Ion transport domain; Cyclic nucleotide-binding domain... 0.02 OrthoFinder
SymbC1.scaffold84.10 84.10 Cyclic nucleotide-binding domain; Ion transport domain... 0.02 OrthoFinder
TP05G05200.1 No alias EF-hand domain; Cyclic nucleotide-binding domain; Ion... 0.02 OrthoFinder
TP18G01730.1 No alias Hypothetical protein 0.01 OrthoFinder
Vocar.0082s0001.1 32886964 Cyclic nucleotide-binding domain [Interproscan]. 0.03 OrthoFinder
XM_002500831.1 MICPUN_56797, 56797 Voltage-gated ion channel superfamily 0.02 OrthoFinder
XM_002500883.1 MICPUN_56911, 56911 Voltage-gated ion channel superfamily 0.03 OrthoFinder
XM_002504550.1 MICPUN_61321, 61321 Voltage-gated ion channel superfamily 0.02 OrthoFinder
lcl|BLLF01000349.1_cds_GFH10809.1_5286 HaLaN_06192, GFH10809 Cyclic nucleotide-binding domain-containing protein 0.01 OrthoFinder
lcl|BLLF01001221.1_cds_GFH17913.1_12390 HaLaN_14637, GFH17913 Cyclic nucleotide-binding domain-containing protein 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499941.1_8894 KAA8499941 Potassium voltage-gated channel subfamily H member 7 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 147 379
IPR000595 cNMP-bd_dom 475 556
No external refs found!