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  5. Dusal.1403s00002.1

Dusal.1403s00002.1 (33199971)


Aliases : 33199971

Description : WD40 repeat [Interproscan].


Gene families : OG_01_0003140 (OrthoFinder) Phylogenetic Tree(s): OG0003140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.1403s00002.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000852.39 tig00000852_g5050.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder
Cre13.g606850 30784338 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder
Cz05g19220.t1 No alias WD40 repeat [Interproscan]. 0.04 OrthoFinder
EOD21310 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
EOD27407 No alias WD40 repeat [Interproscan]. 0.01 OrthoFinder
PTI_03G06630.1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
Sro26_g017510.1 Contig2432.g19922 RNA-associated protein 4 homolog 0.04 OrthoFinder
Vocar.0043s0033.1 32886908 Hypothetical protein 0.03 OrthoFinder
XM_002505872.1 MICPUN_104036, 104036 WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_003057188.1 MicpuC2_46667, 46667 WD40 repeat [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01009397.1_cds_GFH33712.1_28189 HaLaN_33121, GFH33712 WD_REPEATS_REGION domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61122.1_641 PRW61122 WD40 repeat 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
BP GO:0000469 cleavage involved in rRNA processing IEP Enrichment
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0007009 plasma membrane organization IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Enrichment
BP GO:0015693 magnesium ion transport IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015914 phospholipid transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
BP GO:0017121 plasma membrane phospholipid scrambling IEP Enrichment
MF GO:0017128 phospholipid scramblase activity IEP Enrichment
MF GO:0019104 DNA N-glycosylase activity IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
BP GO:0034204 lipid translocation IEP Enrichment
BP GO:0034227 tRNA thio-modification IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0045332 phospholipid translocation IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Enrichment
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Enrichment
BP GO:0097035 regulation of membrane lipid distribution IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140303 intramembrane lipid transporter activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 233 260
No external refs found!