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  5. Dusal.0852s00004.1

Dusal.0852s00004.1 (33185428)


Aliases : 33185428

Description : ABC transporter-like; ABC transporter type 1, transmembrane domain [Interproscan].


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0852s00004.1
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.2 tig00000718_g3679.t1 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020553.190 tig00020553_g10680.t1 ABC transporter C family member 4 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre13.g564900 30784450, MRP3 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cre14.g618600 30776292, MRP7 ABC transporter C family member 13 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz05g17060.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.04 OrthoFinder
EOD12092 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
EOD26066 No alias EF-hand domain; ABC transporter type 1, transmembrane... 0.02 OrthoFinder
PTI_03G06590.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
Sro1322_g262550.1 Contig3764.g28905 Multiple drug resistance-associated protein-like transporter 1 0.04 OrthoFinder
Sro183_g079600.1 Contig3056.g24305 Multiple drug resistance-associated protein-like transporter 1 0.01 OrthoFinder
SymbC1.scaffold2220.1 2220.1 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
SymbC1.scaffold6437.5 6437.5 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
TP04G05700.1 No alias ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
Transcript_contig_55599 55599 ABC transporter type 1, transmembrane domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_56264 56264 ABC transporter type 1, transmembrane domain; ABC... 0.05 OrthoFinder
Transcript_contig_56405 56405 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Vocar.0012s0088.1 32894879 ABC transporter-like; ABC transporter type 1,... 0.05 OrthoFinder
XM_002508173.1 MICPUN_94915, 94915 ATP-binding cassette superfamily 0.04 OrthoFinder
XM_003055793.1 MicpuC2_55005, 55005 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_003055794.1 MicpuC2_55006, 55006 ATP-binding cassette superfamily 0.02 OrthoFinder
lcl|BLLF01000878.1_cds_GFH15643.1_10120 HaLaN_11904, GFH15643 ATP-binding cassette transporter 0.03 OrthoFinder
lcl|BLLF01003175.1_cds_GFH26596.1_21073 HaLaN_24770, GFH26596 ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56046.1_9960 PRW56046 Multidrug resistance-associated 1 isoform X1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006544 glycine metabolic process IEP Enrichment
BP GO:0006546 glycine catabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009071 serine family amino acid catabolic process IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043486 histone exchange IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 1 149
IPR003439 ABC_transporter-like_ATP-bd 206 355
No external refs found!