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  5. Dusal.0436s00004.1

Dusal.0436s00004.1 (33203582)


Aliases : 33203582

Description : Mre11, DNA-binding; Calcineurin-like phosphoesterase domain, ApaH type [Interproscan].


Gene families : OG_01_0004553 (OrthoFinder) Phylogenetic Tree(s): OG0004553_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0436s00004.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000350.15 tig00000350_g24315.t1 DNA damage response.DNA repair mechanisms.homologous... 0.03 OrthoFinder
EOD35531 No alias Mre11, DNA-binding [Interproscan]. 0.03 OrthoFinder
Vocar.0001s1108.1 32885601 Calcineurin-like phosphoesterase domain, ApaH type;... 0.02 OrthoFinder
XM_002504568.1 MICPUN_61359, 61359 Mre11 DNA repair/recombination protein (MRE11) 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32924.1_3681 PRW32924 Double-strand break repair MRE11 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006302 double-strand break repair IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
MF GO:0030145 manganese ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
CC GO:0030906 retromer, cargo-selective complex IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR007281 Mre11_DNA-bd 234 304
IPR004843 Calcineurin-like_PHP_ApaH 62 210
No external refs found!