1. Home
  2. Species
  3. Dunaliella sp.
  4. Sequence
  5. Dusal.0357s00004.1

Dusal.0357s00004.1 (33189829)


Aliases : 33189829

Description : SNF2-related, N-terminal domain; Helicase, C-terminal; Chromo domain [Interproscan].


Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0357s00004.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000128.11 tig00000128_g7211.t1 ISWI chromatin-remodeling complex ATPase CHR17... 0.04 OrthoFinder
Cpa|evm.model.tig00000217.25 tig00000217_g19158.t1 Chromatin structure-remodeling complex protein SYD... 0.05 OrthoFinder
Cpa|evm.model.tig00000802.67 tig00000802_g4315.t2 Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00000983.26 tig00000983_g5915.t1 RNA biosynthesis.RNA polymerase II-dependent... 0.06 OrthoFinder
Cpa|evm.model.tig00020960.24 tig00020960_g16545.t1 Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cre07.g325700 30774388 ATP-dependent helicase BRM OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre08.g377200 30773522 CHD3-type chromatin-remodeling factor PICKLE... 0.03 OrthoFinder
Cre09.g390000 30781417 RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder
Cre12.g508150 30793288 Chromatin organisation.chromatin remodeling... 0.04 OrthoFinder
Cre16.g647602 30777036 ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre16.g687301 30777125 RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder
Cz05g37180.t1 No alias SNF2-related, N-terminal domain; Helicase, C-terminal... 0.03 OrthoFinder
Cz19g07040.t1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain;... 0.04 OrthoFinder
EOD05386 No alias Chromo domain; Helicase, C-terminal; SNF2-related,... 0.08 OrthoFinder
EOD18155 No alias High mobility group box domain; ISWI, HAND domain;... 0.05 OrthoFinder
EOD25651 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
EOD31716 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
EOD34138 No alias Helicase, C-terminal; SNF2-related, N-terminal domain;... 0.01 OrthoFinder
EOD34139 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
EOD36557 No alias SNF2-related, N-terminal domain [Interproscan]. 0.03 OrthoFinder
EOD36957 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.05 OrthoFinder
EOD37157 No alias Chromo domain; Helicase, C-terminal; SNF2-related,... 0.01 OrthoFinder
EOD39269 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.01 OrthoFinder
EOD41956 No alias Chromo domain; Helicase, C-terminal; SNF2-related,... 0.03 OrthoFinder
OT_01G05670.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain;... 0.02 OrthoFinder
OT_05G01620.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
OT_06G03660.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain;... 0.02 OrthoFinder
OT_07G04400.1 No alias Helicase, C-terminal; ISWI, HAND domain; SNF2-related,... 0.04 OrthoFinder
OT_11G00460.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain;... 0.02 OrthoFinder
OT_17G01920.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
PTI_02G06230.1 No alias Bromodomain; Helicase, C-terminal; Snf2, ATP coupling... 0.02 OrthoFinder
PTI_03G03660.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
PTI_04G04910.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
PTI_05G01880.1 No alias High mobility group box domain; Helicase, C-terminal;... 0.02 OrthoFinder
PTI_10G00070.1 No alias Helicase, C-terminal; High mobility group box domain;... 0.02 OrthoFinder
PTI_12G03630.1 No alias SLIDE domain; Helicase, C-terminal; SNF2-related,... 0.03 OrthoFinder
Sro125_g060200.1 Contig2833.g22731 Chromodomain-helicase-DNA-binding protein 0.03 OrthoFinder
Sro19_g013190.1 Contig446.g5983 CHD3-type chromatin-remodeling factor 0.01 OrthoFinder
Sro264_g102660.1 Contig921.g9692 Probable chromatin-remodeling complex ATPase chain 0.02 OrthoFinder
Sro272_g104840.1 Contig2144.g18025 Chromodomain-helicase-DNA-binding protein 0.01 OrthoFinder
Sro2_g001340.1 Contig467.g6292 CHD3-type chromatin-remodeling factor PICKLE 0.03 OrthoFinder
Sro358_g125960.1 Contig1210.g11383 Probable chromatin-remodeling complex ATPase chain 0.02 OrthoFinder
SymbC1.scaffold1517.8 1517.8 SNF2-related, N-terminal domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold2851.4 2851.4 SNF2-related, N-terminal domain; Protein kinase domain;... 0.01 OrthoFinder
TP11G02170.1 No alias SNF2-related, N-terminal domain; Chromo domain;... 0.01 OrthoFinder
TP12G03300.1 No alias SNF2-related, N-terminal domain; Chromo domain;... 0.02 OrthoFinder
Vocar.0016s0256.1 32897896 SLIDE domain; ISWI, HAND domain; Helicase, C-terminal;... 0.02 OrthoFinder
Vocar.0021s0108.1 32895927 SNF2-related, N-terminal domain [Interproscan]. 0.03 OrthoFinder
XM_002503125.1 MICPUN_91017, 91017 SNF2 super family 0.03 OrthoFinder
XM_002504726.1 MICPUN_62221, 62221 SNF2 super family 0.02 OrthoFinder
XM_003055229.1 MicpuC2_12258, 12258 Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
XM_003061140.1 MicpuC2_28265, 28265 SNF2 super family 0.02 OrthoFinder
XM_003061151.1 MicpuC2_60694, 60694 SNF2 super family 0.02 OrthoFinder
XM_003061313.1 MicpuC2_50939, 50939 SNF2 super family 0.03 OrthoFinder
XM_003061952.1 MicpuC2_51787, 51787 SNF2 super family 0.02 OrthoFinder
XM_003062178.1 MicpuC2_21039, 21039 SNF2 super family 0.02 OrthoFinder
lcl|BLLF01000141.1_cds_GFH08153.1_2630 HaLaN_03070, GFH08153 Helicase, C-terminal [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000629.1_cds_GFH13581.1_8058 HaLaN_09499, GFH13581 SNF2-related, N-terminal domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01003474.1_cds_GFH27437.1_21914 HaLaN_25757, GFH27437 SNF2-related, N-terminal domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01003574.1_cds_GFH27683.1_22160 HaLaN_26047, GFH27683 SNF2-related, N-terminal domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56740.1_9705 PRW56740 Chromatin-remodeling complex ATPase chain 0.06 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498955.1_7908 KAA8498955 SWI/SNF chromatin-remodeling complex subunit snf22 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Enrichment
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 752 865
IPR000330 SNF2_N 500 661
IPR023780 Chromo_domain 440 501
No external refs found!