Dusal.0008s00033.1 (33198881)

Aliases : 33198881

Description : ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain [Interproscan].

Gene families : OG_01_0000083 (OrthoFinder) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dusal.0008s00033.1
Cluster	HCCA: Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
Cz09g19130.t1	No alias	AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;...	0.04	OrthoFinder
OT_01G03790.1	No alias	AAA ATPase, AAA+ lid domain; Vps4 oligomerisation,...	0.05	OrthoFinder
PTI_10G03770.1	No alias	AAA ATPase, AAA+ lid domain; CDC48, N-terminal...	0.02	OrthoFinder
PTI_11G01980.1	No alias	AAA ATPase, AAA+ lid domain; CDC48, N-terminal...	0.04	OrthoFinder
Sro157_g071160.1	Contig2362.g19406	Spermatogenesis-associated protein 5-like protein 1	0.02	OrthoFinder
Sro287_g108550.1	Contig252.g3096	Transitional endoplasmic reticulum ATPase	0.02	OrthoFinder
TP01G02020.1	No alias	ATPase, AAA-type, core; CDC48, domain 2; AAA ATPase,...	0.01	OrthoFinder
Transcript_contig_54277	54277	CDC48, N-terminal subdomain; AAA ATPase, AAA+ lid...	0.03	OrthoFinder
Vocar.0026s0006.1	32892589	ATPase, AAA-type, core [Interproscan].	0.03	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8499724.1_8677	KAA8499724	Cell division cycle protein 48-like	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEP	Enrichment
BP	GO:0002097	tRNA wobble base modification	IEP	Enrichment
BP	GO:0002098	tRNA wobble uridine modification	IEP	Enrichment
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Enrichment
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0003916	DNA topoisomerase activity	IEP	Enrichment
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004222	metalloendopeptidase activity	IEP	Enrichment
MF	GO:0004366	glycerol-3-phosphate O-acyltransferase activity	IEP	Enrichment
MF	GO:0005096	GTPase activator activity	IEP	Enrichment
BP	GO:0006265	DNA topological change	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0006399	tRNA metabolic process	IEP	Enrichment
BP	GO:0006400	tRNA modification	IEP	Enrichment
BP	GO:0006508	proteolysis	IEP	Enrichment
BP	GO:0006807	nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0008033	tRNA processing	IEP	Enrichment
MF	GO:0008047	enzyme activator activity	IEP	Enrichment
BP	GO:0008152	metabolic process	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008237	metallopeptidase activity	IEP	Enrichment
MF	GO:0008270	zinc ion binding	IEP	Enrichment
MF	GO:0008374	O-acyltransferase activity	IEP	Enrichment
BP	GO:0009451	RNA modification	IEP	Enrichment
BP	GO:0009966	regulation of signal transduction	IEP	Enrichment
BP	GO:0010035	response to inorganic substance	IEP	Enrichment
BP	GO:0010038	response to metal ion	IEP	Enrichment
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	Enrichment
BP	GO:0010646	regulation of cell communication	IEP	Enrichment
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Enrichment
MF	GO:0016746	acyltransferase activity	IEP	Enrichment
MF	GO:0016755	aminoacyltransferase activity	IEP	Enrichment
MF	GO:0016756	glutathione gamma-glutamylcysteinyltransferase activity	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
BP	GO:0019538	protein metabolic process	IEP	Enrichment
BP	GO:0019748	secondary metabolic process	IEP	Enrichment
BP	GO:0023051	regulation of signaling	IEP	Enrichment
MF	GO:0030247	polysaccharide binding	IEP	Enrichment
BP	GO:0030488	tRNA methylation	IEP	Enrichment
MF	GO:0030695	GTPase regulator activity	IEP	Enrichment
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEP	Enrichment
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Enrichment
CC	GO:0033588	elongator holoenzyme complex	IEP	Enrichment
BP	GO:0034470	ncRNA processing	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
CC	GO:0034708	methyltransferase complex	IEP	Enrichment
MF	GO:0035091	phosphatidylinositol binding	IEP	Enrichment
BP	GO:0042221	response to chemical	IEP	Enrichment
MF	GO:0043169	cation binding	IEP	Enrichment
BP	GO:0043170	macromolecule metabolic process	IEP	Enrichment
BP	GO:0043412	macromolecule modification	IEP	Enrichment
BP	GO:0043414	macromolecule methylation	IEP	Enrichment
CC	GO:0043527	tRNA methyltransferase complex	IEP	Enrichment
BP	GO:0044238	primary metabolic process	IEP	Enrichment
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Enrichment
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Enrichment
MF	GO:0046872	metal ion binding	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
BP	GO:0046937	phytochelatin metabolic process	IEP	Enrichment
BP	GO:0046938	phytochelatin biosynthetic process	IEP	Enrichment
BP	GO:0048583	regulation of response to stimulus	IEP	Enrichment
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Enrichment
MF	GO:0051213	dioxygenase activity	IEP	Enrichment
MF	GO:0051499	D-aminoacyl-tRNA deacylase activity	IEP	Enrichment
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Enrichment
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Enrichment
BP	GO:0071103	DNA conformation change	IEP	Enrichment
BP	GO:0071704	organic substance metabolic process	IEP	Enrichment
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Enrichment
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Enrichment
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Enrichment
MF	GO:2001070	starch binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	973	1104
IPR003959	ATPase_AAA_core	615	763
IPR041569	AAA_lid_3	1127	1172
IPR041569	AAA_lid_3	788	822

External Links

No external refs found!

Dusal.0008s00033.1 (33198881)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation