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  5. Cz03g10170.t1

Cz03g10170.t1


Description : DNA glycosylase/AP lyase, H2TH DNA-binding; SAP domain [Interproscan].


Gene families : OG_01_0001953 (OrthoFinder) Phylogenetic Tree(s): OG0001953_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz03g10170.t1
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000955.10 tig00000955_g5782.t1 DNA damage response.DNA repair mechanisms.base excision... 0.04 OrthoFinder
EOD14820 No alias Putative formamidopyrimidine-DNA glycosylase [Ensembl]. 0.05 OrthoFinder
EOD20250 No alias Putative formamidopyrimidine-DNA glycosylase [Ensembl]. 0.05 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495173.1_3703 KAA8495173 Endonuclease 8 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEA Interproscan
BP GO:0006289 nucleotide-excision repair IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003034 SAP_dom 306 337
IPR015886 DNA_glyclase/AP_lyase_DNA-bd 130 212
No external refs found!