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  5. Cz01g24310.t1

Cz01g24310.t1


Description : Starch synthase, catalytic domain; Glycosyl transferase, family 1 [Interproscan].


Gene families : OG_01_0000262 (OrthoFinder) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cz01g24310.t1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000135.1 tig00000135_g7967.t1 Granule-bound starch synthase 1,... 0.03 OrthoFinder
Cre04.g215150 30791328, SSS1 Enzyme classification.EC_2 transferases.EC_2.4... 0.02 OrthoFinder
Dusal.0532s00001.1 33194435 Starch synthase, catalytic domain [Interproscan]. 0.02 OrthoFinder
Vocar.0001s1467.1 32885239 Glycosyl transferase, family 1; Starch synthase,... 0.02 OrthoFinder
Vocar.0015s0224.1 32898942 Glycosyl transferase, family 1; Starch synthase,... 0.02 OrthoFinder
XM_003061857.1 MicpuC2_49698, 49698 Glycosyltransferase family 5 protein (GBSSI) 0.02 OrthoFinder
XM_003063302.1 MicpuC2_29784, 29784 Glycosyltransferase family 5 protein (SSIIA) 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61322.1_461 PRW61322 GBSSIa 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015079 potassium ion transmembrane transporter activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071805 potassium ion transmembrane transport IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
CC GO:1902554 serine/threonine protein kinase complex IEP Enrichment
CC GO:1902911 protein kinase complex IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
CC GO:1990316 Atg1/ULK1 kinase complex IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 164 406
IPR001296 Glyco_trans_1 466 607
No external refs found!