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  5. Transcript_contig_89438

Transcript_contig_89438 (89438)


Aliases : 89438

Description : Chloride channel, voltage gated [Interproscan].


Gene families : OG_01_0000175 (OrthoFinder) Phylogenetic Tree(s): OG0000175_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89438
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Cre13.g574000 30784545 Chloride channel protein CLC-c OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz02g19170.t1 No alias Chloride channel, voltage gated; CBS domain [Interproscan]. 0.01 OrthoFinder
Dusal.0571s00003.1 33195264 Chloride channel, voltage gated; CBS domain [Interproscan]. 0.01 OrthoFinder
EOD03891 No alias CBS domain; Chloride channel, voltage gated [Interproscan]. 0.03 OrthoFinder
Sro804_g204950.1 Contig3806.g29168 Putative chloride channel-like protein CLC-g 0.01 OrthoFinder
XM_002504123.1 MICPUN_61103, 61103 Chloride Carrier/Channel family 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity IEA Interproscan
BP GO:0006821 chloride transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0015109 chromate transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
BP GO:0015703 chromate transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
BP GO:0030328 prenylcysteine catabolic process IEP Enrichment
BP GO:0030329 prenylcysteine metabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001807 Cl-channel_volt-gated 172 638
No external refs found!