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  5. Transcript_contig_89293

Transcript_contig_89293 (89293)


Aliases : 89293

Description : ABC-2 type transporter; ABC transporter-like [Interproscan].


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_89293
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Cre05.g241350 30783120 ABC transporter G family member 28 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz14g16020.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
PTI_16G01030.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
Sro223_g091300.1 Contig370.g4999 Putative white-brown complex homolog protein 30 0.01 OrthoFinder
Sro380_g130710.1 Contig3948.g30263 Putative white-brown complex homolog protein 30 0.01 OrthoFinder
Sro538_g162620.1 Contig95.g1103 Putative white-brown complex homolog protein 30 0.02 OrthoFinder
Sro7_g006000.1 Contig389.g5253 Putative white-brown complex homolog protein 30 0.01 OrthoFinder
Vocar.0036s0047.1 32892220 ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
XM_003054877.1 MicpuC2_37849, 37849 ATP-binding cassette superfamily 0.02 OrthoFinder
lcl|BLLF01001823.1_cds_GFH21408.1_15885 HaLaN_18712, GFH21408 ABC transporter domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39060.1_2535 PRW39060 Abc transporter G family 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 336 542
IPR003439 ABC_transporter-like_ATP-bd 64 204
No external refs found!