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Aliases : tig00000889_g5288.t1
Description : Protein TIC 55, chloroplastic OS=Arabidopsis thaliana
Gene families : OG_01_0000145 (OrthoFinder) Phylogenetic Tree(s): OG0000145_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000889.1 | |
| Cluster | HCCA: Cluster_177 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre03.g173450 | 30787929 | Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Dusal.0081s00035.1 | 33198236 | Pheophorbide a oxygenase; Rieske [2Fe-2S] iron-sulphur... | 0.02 | OrthoFinder | |
| SymbC1.scaffold6359.3 | 6359.3 | Rieske [2Fe-2S] iron-sulphur domain; Pheophorbide a... | 0.02 | OrthoFinder | |
| Vocar.0022s0065.1 | 32891758 | Rieske [2Fe-2S] iron-sulphur domain; Pheophorbide a... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Enrichment |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004497 | monooxygenase activity | IEP | Enrichment |
| MF | GO:0004499 | N,N-dimethylaniline monooxygenase activity | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| MF | GO:0004521 | endoribonuclease activity | IEP | Enrichment |
| MF | GO:0004525 | ribonuclease III activity | IEP | Enrichment |
| MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Enrichment |
| MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Enrichment |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0017171 | serine hydrolase activity | IEP | Enrichment |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
| MF | GO:0050661 | NADP binding | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| MF | GO:0140299 | small molecule sensor activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017941 | Rieske_2Fe-2S | 120 | 206 |
| No external refs found! |