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Transcript_contig_8261 (8261)


Aliases : 8261

Description : Ribosomal RNA methyltransferase FtsJ domain; RNA-binding S4 domain [Interproscan].


Gene families : OG_01_0003789 (OrthoFinder) Phylogenetic Tree(s): OG0003789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_8261
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000403.56 tig00000403_g313.t1 No description available 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
BP GO:0032259 methylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 58 99
IPR002877 rRNA_MeTrfase_FtsJ_dom 114 174
No external refs found!