Transcript_contig_78875 (78875)

Aliases : 78875

Description : STAS domain; SLC26A/SulP transporter domain [Interproscan].

Gene families : OG_01_0001297 (OrthoFinder) Phylogenetic Tree(s): OG0001297_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_78875
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
Cre17.g723350	30782303, SUL2	Solute transport.carrier-mediated transport.APC...	0.02	OrthoFinder
Cz03g08060.t1	No alias	SLC26A/SulP transporter domain; STAS domain [Interproscan].	0.02	OrthoFinder
Cz03g08070.t1	No alias	SLC26A/SulP transporter domain [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000009.1_cds_PRW56212.1_10322	PRW56212	Sulfate transporter	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008272	sulfate transport	IEA	Interproscan
MF	GO:0008509	anion transmembrane transporter activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015116	sulfate transmembrane transporter activity	IEA	Interproscan
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0072348	sulfur compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901682	sulfur compound transmembrane transporter activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003916	DNA topoisomerase activity	IEP	Enrichment
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	Enrichment
MF	GO:0004089	carbonate dehydratase activity	IEP	Enrichment
MF	GO:0005506	iron ion binding	IEP	Enrichment
BP	GO:0006265	DNA topological change	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
MF	GO:0008094	ATPase, acting on DNA	IEP	Enrichment
MF	GO:0008430	selenium binding	IEP	Enrichment
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Enrichment
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Enrichment
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Enrichment
MF	GO:0016836	hydro-lyase activity	IEP	Enrichment
MF	GO:0043169	cation binding	IEP	Enrichment
MF	GO:0046872	metal ion binding	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
MF	GO:0051213	dioxygenase activity	IEP	Enrichment
BP	GO:0051276	chromosome organization	IEP	Enrichment
BP	GO:0071103	DNA conformation change	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011547	SLC26A/SulP_dom	86	477
IPR002645	STAS_dom	529	646

External Links

No external refs found!