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  5. Transcript_contig_78034

Transcript_contig_78034 (78034)


Aliases : 78034

Description : Cation/H+ exchanger [Interproscan].


Gene families : OG_01_0003466 (OrthoFinder) Phylogenetic Tree(s): OG0003466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78034
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000014.1_cds_GFH05937.1_414 HaLaN_00483, GFH05937 Na_H_Exchanger domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA Interproscan
MF GO:0015299 solute:proton antiporter activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR006153 Cation/H_exchanger 261 632
No external refs found!