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  5. Transcript_contig_59102

Transcript_contig_59102 (59102)


Aliases : 59102

Description : SBP domain [Interproscan].


Gene families : OG_01_0000101 (OrthoFinder) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_59102
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cre02.g104700 30786376 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder
Vocar.0003s0172.1 32888906 SBP domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000469.1_cds_GFH12104.1_6581 HaLaN_07733, GFH12104 Phosphatase 2C 0.01 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61140.1_85 PRW61140 SBP domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56339.1_10103 PRW56339 Squamosa promoter-binding 2 0.01 OrthoFinder
lcl|LHPG02000027.1_cds_PRW05936.1_5959 PRW05936 Squamosa promoter binding 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006658 phosphatidylserine metabolic process IEP Enrichment
BP GO:0006659 phosphatidylserine biosynthetic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
InterPro domains Description Start Stop
IPR004333 SBP_dom 92 166
No external refs found!