Cpa|evm.model.tig00000754.17 (tig00000754_g3900.t1)


Aliases : tig00000754_g3900.t1

Description : Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0004943 (OrthoFinder) Phylogenetic Tree(s): OG0004943_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000754.17
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Cre12.g550700 30793240 Nucleotide metabolism.purines.ribonucleotide (RN)... 0.01 OrthoFinder
Cz02g09100.t1 No alias Formyl transferase, N-terminal [Interproscan]. 0.02 OrthoFinder
OT_06G02990.1 No alias Formyl transferase, N-terminal [Interproscan]. 0.01 OrthoFinder
Vocar.0007s0243.1 32888120 Formyl transferase, N-terminal [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002376 Formyl_transf_N 32 121
IPR002376 Formyl_transf_N 123 191
No external refs found!