Heatmap: Cluster_123 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000042.102 (tig00000042_g15497.t1)
-0.86 0.15 -0.23 -0.08 0.56 0.62 0.74 0.74 1.34 0.5 0.27 0.09 -1.72 -1.9 -1.03 -1.53 -1.09 0.42 0.14 -0.26 -3.98 -1.87 0.17 0.38 0.22 -0.15
Cpa|evm.model.tig00000073.4 (tig00000073_g1684.t1)
0.01 0.22 -0.57 0.1 0.26 0.07 0.41 0.71 0.96 0.58 1.01 0.34 -1.47 -1.09 -1.02 -1.7 -1.43 0.1 -0.14 -0.98 -2.39 -0.91 1.2 -0.32 0.16 -0.49
Cpa|evm.model.tig00000093.117 (tig00000093_g3548.t1)
-2.52 -0.01 -0.0 0.31 0.61 0.6 0.77 0.61 0.77 0.63 0.46 -0.01 -3.44 -1.08 -0.66 -1.21 -0.46 0.18 0.06 -0.46 -4.2 -0.93 0.44 0.04 0.56 0.0
Cpa|evm.model.tig00000113.25 (tig00000113_g5593.t1)
-2.49 -3.27 -1.26 -0.1 -0.09 0.48 1.44 1.38 1.3 0.45 -0.38 -0.74 -2.75 -0.08 -0.86 0.42 0.03 0.2 -0.28 0.16 -2.31 -0.92 0.14 -0.1 -0.04 -0.53
Cpa|evm.model.tig00000114.34 (tig00000114_g6042.t1)
-2.54 -0.67 -0.77 0.05 0.56 0.57 0.29 0.54 0.7 0.46 0.8 0.08 -4.29 -0.54 -0.35 0.42 -0.07 0.13 0.25 0.14 -4.86 -0.98 0.55 0.18 -0.17 -0.15
Cpa|evm.model.tig00000133.38 (tig00000133_g7699.t1)
-1.85 -0.85 -0.76 -0.06 0.49 1.05 0.46 0.45 0.43 0.47 0.33 0.2 -1.52 -0.83 -0.85 -0.73 -0.28 0.17 0.27 0.3 -1.73 -1.41 0.84 0.54 -0.18 0.01
Cpa|evm.model.tig00000158.67 (tig00000158_g10173.t1)
-0.98 0.04 0.41 0.6 0.74 0.52 0.1 0.33 0.51 0.03 0.32 0.27 -1.27 -0.63 -0.9 -0.47 -0.65 -0.6 -0.64 -0.27 -1.26 -1.21 1.06 0.38 0.04 -0.09
Cpa|evm.model.tig00000237.48 (tig00000237_g20497.t1)
-0.83 -0.07 -0.18 0.08 0.52 0.91 0.94 0.73 0.62 0.14 0.13 -0.29 -1.22 -0.68 -0.05 -0.02 -0.22 0.04 0.19 -0.13 -2.98 -0.56 0.04 -0.18 -0.09 -1.01
Cpa|evm.model.tig00000383.85 (tig00000383_g24696.t1)
-3.35 -1.53 -0.79 0.08 0.81 1.13 1.08 0.81 1.15 0.43 0.42 0.12 -4.01 -0.67 -0.58 -0.88 -0.44 0.17 0.08 -0.46 -4.4 -0.11 0.67 -0.92 0.02 -1.06
Cpa|evm.model.tig00000473.11 (tig00000473_g1210.t1)
0.03 -0.18 0.02 0.64 0.65 0.37 0.35 0.3 0.55 0.57 0.46 0.61 -0.23 -0.71 -1.17 -0.85 -0.76 0.15 -0.02 -0.55 -2.81 -0.38 0.79 -0.72 -0.41 -1.07
Cpa|evm.model.tig00000480.67 (tig00000480_g1335.t1)
-1.8 -1.48 -0.5 -0.27 0.49 1.69 1.76 1.18 1.03 0.09 -0.34 -0.24 -1.99 -1.07 -0.67 -0.37 -0.32 -0.01 0.14 -0.16 -2.71 -3.8 0.19 -1.57 -0.38 -1.37
Cpa|evm.model.tig00000605.9 (tig00000605_g2474.t1)
-0.09 -0.09 0.08 0.33 0.49 0.56 0.58 0.59 0.7 0.3 0.36 0.24 -0.13 -1.02 -0.83 -0.79 -0.47 -0.21 -0.51 -0.37 -1.6 -0.08 0.57 -0.18 -0.39 -0.76
Cpa|evm.model.tig00000615.47 (tig00000615_g2576.t1)
-2.86 -0.78 -0.18 0.1 0.52 1.18 0.95 0.8 0.59 0.01 -0.15 -0.28 -2.34 -0.34 -0.21 0.28 -0.04 -0.02 0.22 0.21 -3.36 -0.51 0.35 -0.47 -0.18 -0.52
Cpa|evm.model.tig00000692.8 (tig00000692_g3201.t1)
-0.5 0.14 0.26 0.58 0.3 0.15 0.28 0.52 0.41 0.41 0.41 0.22 -0.44 -0.66 -0.85 -0.49 -0.6 -0.14 -0.47 -0.54 -1.32 -0.45 0.58 -0.29 0.61 -0.41
Cpa|evm.model.tig00000737.28 (tig00000737_g3808.t1)
-3.85 -1.44 -0.46 0.14 0.73 0.92 0.96 0.7 0.98 0.65 0.56 -0.11 -3.66 -0.98 -0.1 0.18 -0.28 -0.17 -0.22 -0.3 -2.57 -1.04 0.99 -0.29 -0.67 -0.92
Cpa|evm.model.tig00000741.1 (tig00000741_g3822.t1)
-0.84 -0.11 0.14 0.36 0.51 0.74 0.73 0.57 0.59 0.41 0.4 0.35 -0.65 -0.39 -0.46 -0.34 -0.4 -0.1 -0.15 -0.36 -3.13 -0.62 0.14 -0.4 -0.33 -0.4
Cpa|evm.model.tig00000741.2 (tig00000741_g3822.t1)
-0.94 -0.31 -0.29 0.19 0.67 1.01 0.65 0.71 0.67 0.16 0.23 -0.06 -0.63 -0.53 -0.39 -0.62 -0.67 -0.12 -0.06 -0.45 -3.18 -0.21 0.38 -0.83 0.12 0.21
Cpa|evm.model.tig00000741.30 (tig00000741_g3847.t1)
-0.99 -0.79 -0.02 -0.02 0.16 0.07 0.57 0.75 0.44 0.42 0.51 0.06 -0.31 -0.16 -0.28 -0.63 0.05 0.14 0.29 -0.04 -2.47 -0.78 0.67 -0.75 0.24 -0.27
Cpa|evm.model.tig00000754.17 (tig00000754_g3900.t1)
-1.73 -1.52 -1.27 -0.52 0.31 0.74 1.05 0.94 0.89 0.73 0.56 0.02 -2.0 -0.63 -0.7 -0.73 -0.24 0.04 0.19 0.06 -3.91 -0.48 0.67 -0.02 -0.0 -0.33
Cpa|evm.model.tig00000828.32 (tig00000828_g4636.t1)
-1.49 0.33 0.18 0.89 0.89 0.5 0.4 0.62 0.5 0.28 0.28 0.0 -3.19 -1.54 -0.77 -1.2 -0.35 -0.2 -0.25 0.14 -4.79 -1.52 0.48 0.05 0.68 -0.07
Cpa|evm.model.tig00000903.3 (tig00000903_g5500.t1)
0.02 0.66 0.48 1.08 1.09 0.63 0.28 0.17 0.23 -0.04 0.3 0.24 -0.64 -1.66 -1.78 -1.29 -1.39 -1.15 -0.54 -1.36 -3.61 -1.0 1.7 -0.8 -0.16 -1.13
Cpa|evm.model.tig00000989.1 (tig00000989_g6078.t1)
-2.36 -0.6 -0.41 0.01 0.73 0.34 0.42 0.61 0.96 0.5 0.48 0.2 -3.52 -0.55 -0.14 -0.48 -0.19 0.03 0.5 0.01 -4.87 -1.41 0.15 -0.11 0.74 -0.22
Cpa|evm.model.tig00001021.10 (tig00001021_g6308.t1)
-3.45 -2.22 -1.05 -0.17 0.73 1.25 1.38 0.83 0.93 0.55 0.11 -0.42 -2.81 -1.35 -0.78 -0.97 -0.43 0.04 -0.1 0.28 -3.76 -0.79 0.89 -0.23 0.11 -0.45
Cpa|evm.model.tig00001406.3 (tig00001406_g8593.t1)
-0.84 -0.01 -0.09 0.41 0.72 0.87 0.59 0.53 0.65 0.4 0.4 0.29 -1.93 -0.47 -0.35 -0.21 -0.67 0.02 -0.3 -0.49 -2.57 -0.67 0.35 -0.43 -0.15 -0.29
Cpa|evm.model.tig00001537.4 (tig00001537_g9298.t1)
-3.61 -1.75 -0.57 -0.04 0.51 0.91 1.38 1.09 1.12 0.23 -0.26 -0.92 -3.35 -0.61 -0.51 0.12 -0.29 0.22 0.16 0.01 -2.49 -0.49 0.75 -1.42 0.01 -0.73
Cpa|evm.model.tig00001574.7 (tig00001574_g9354.t1)
-0.97 0.1 0.33 0.5 0.62 0.81 0.42 0.31 0.45 0.18 0.18 0.22 -1.09 -0.3 -0.39 -0.39 -0.48 -0.23 0.26 -0.23 -6.48 -0.54 0.7 -0.54 -0.14 -0.41
Cpa|evm.model.tig00001636.7 (tig00001636_g9530.t1)
-0.2 -0.45 -0.39 -0.04 0.5 0.78 0.52 0.27 0.13 0.07 -0.04 0.13 -0.12 -0.92 -0.71 -0.9 -0.59 -0.44 -1.14 -0.37 -1.36 0.62 0.61 0.11 0.5 0.61
Cpa|evm.model.tig00020554.88 (tig00020554_g10867.t1)
-0.28 0.1 -0.2 0.11 0.2 0.13 0.24 0.37 0.19 0.22 0.79 0.58 -0.21 -1.22 -0.4 -0.55 -0.86 -0.2 -0.2 -0.69 -4.14 0.46 0.88 -0.09 0.34 -0.33
Cpa|evm.model.tig00020563.166 (tig00020563_g11368.t1)
-0.01 0.08 -0.25 0.36 0.52 0.25 0.27 0.49 0.81 0.71 0.77 0.48 -0.15 -1.42 -0.86 -1.19 -1.34 0.09 -0.02 -0.41 -4.2 -1.11 0.87 -0.48 -0.0 -0.85
Cpa|evm.model.tig00020592.8 (tig00020592_g11638.t1)
-1.11 -0.49 -0.3 0.15 0.62 0.81 0.94 0.63 0.63 0.55 0.66 0.41 -0.9 -1.54 -0.8 -1.0 -0.54 -0.08 -0.24 -0.2 -2.97 -0.54 0.99 -0.02 -0.7 -0.9
Cpa|evm.model.tig00020610.82 (tig00020610_g12029.t1)
-3.05 -0.75 -0.36 0.44 0.85 0.93 0.84 0.69 0.0 0.16 -0.05 -0.37 -3.4 -1.95 -1.06 -2.1 0.04 0.7 0.4 0.36 -3.03 -1.13 0.65 -0.4 0.66 0.47
Cpa|evm.model.tig00020610.93 (tig00020610_g12039.t1)
-1.01 -0.5 -1.32 0.49 0.93 0.9 1.44 1.35 -0.55 -0.6 -1.08 -2.75 -4.41 -1.07 -0.73 -0.24 -0.54 0.78 0.64 -0.3 -3.14 -1.73 0.72 -1.51 0.85 0.05
Cpa|evm.model.tig00020704.20 (tig00020704_g13162.t1)
-0.61 0.25 0.45 0.59 0.48 0.57 0.46 0.63 0.45 -0.13 -0.02 -0.31 -1.21 -1.18 -1.43 -0.54 -0.34 -0.09 -0.3 0.07 -3.12 -0.48 1.14 -0.89 0.39 0.03
Cpa|evm.model.tig00020704.39 (tig00020704_g13181.t1)
-0.52 -0.71 -0.35 0.12 0.47 0.63 0.41 0.38 0.4 0.4 0.47 0.27 -0.52 -0.46 -0.66 -0.69 -0.71 -0.62 -0.79 -0.71 -2.74 0.56 0.73 0.05 0.58 0.14
Cpa|evm.model.tig00020734.19 (tig00020734_g13575.t1)
-3.39 -0.78 -0.36 0.15 0.55 0.89 1.01 0.94 0.56 0.19 0.08 0.11 -3.89 -0.81 -0.37 -0.61 -0.09 0.25 0.16 0.06 -4.18 -2.38 0.7 -0.3 0.8 -0.62
Cpa|evm.model.tig00020830.71 (tig00020830_g14455.t1)
-0.74 0.3 0.45 0.5 0.54 0.53 0.31 0.48 0.11 0.12 0.12 0.07 -1.28 -0.81 -0.35 -0.48 -0.39 -0.09 -0.13 -0.18 -1.38 -0.27 1.04 -0.41 -0.26 -0.53
Cpa|evm.model.tig00020892.9 (tig00020892_g14911.t1)
-0.29 0.57 0.5 0.63 0.5 0.25 0.55 0.67 0.39 0.5 0.31 0.21 -0.35 -1.4 -1.08 -1.48 -0.76 -0.02 -0.02 -0.11 -2.6 -0.91 0.66 -1.06 0.1 -0.66
Cpa|evm.model.tig00020934.51 (tig00020934_g16119.t1)
-2.65 -2.36 -0.83 -0.01 0.78 0.96 0.71 0.22 0.4 0.39 0.35 -0.07 -2.32 0.32 -0.37 -0.05 -0.71 0.42 0.08 0.55 -5.5 -2.49 1.43 -0.1 -0.79 -0.46
Cpa|evm.model.tig00020943.50 (tig00020943_g16293.t1)
-3.68 -0.97 0.44 0.71 0.66 0.69 0.72 0.63 0.73 0.79 0.77 0.43 -2.03 -1.71 -0.66 -1.28 -0.97 -0.43 -0.29 -0.16 -3.63 0.3 0.48 -0.81 -0.25 -0.15
Cpa|evm.model.tig00020960.61 (tig00020960_g16587.t1)
-0.26 0.21 0.15 0.27 0.62 0.5 0.68 0.69 0.81 0.45 0.13 -0.1 -0.67 -1.03 -0.63 -0.76 -0.39 0.08 -0.3 -0.18 -3.29 -0.91 0.33 -0.76 -0.02 0.06
Cpa|evm.model.tig00020961.29 (tig00020961_g16649.t1)
-1.58 0.25 0.07 0.61 0.73 0.64 0.7 0.73 0.63 0.82 0.6 0.13 -1.56 -1.58 -0.84 -1.6 -0.76 -0.28 -0.09 -0.33 -3.99 -1.07 0.87 -0.08 -0.27 -0.73
Cpa|evm.model.tig00020965.23 (tig00020965_g16839.t1)
-2.24 -0.37 0.13 0.56 0.96 0.92 0.8 0.54 0.39 0.21 0.27 0.13 -1.87 -1.61 -1.01 -1.21 -0.7 0.26 -0.16 -0.04 -3.99 -1.16 0.89 -0.36 0.34 0.05
Cpa|evm.model.tig00021017.21 (tig00021017_g17196.t1)
-0.46 -0.4 -0.66 0.06 0.32 0.37 0.19 0.23 0.46 0.14 0.16 0.11 -0.63 0.0 -0.44 -0.49 -0.5 -0.32 -0.3 -0.67 -3.29 1.04 0.42 0.03 0.5 0.4
Cpa|evm.model.tig00021038.47 (tig00021038_g17537.t1)
-0.96 -0.23 0.1 0.28 0.5 0.65 0.72 0.44 0.56 0.02 0.01 0.11 -0.58 -0.34 0.0 -0.33 0.2 -0.01 -0.15 -0.06 -2.21 -1.52 0.6 -0.43 -0.01 -0.49
Cpa|evm.model.tig00021073.15 (tig00021073_g18018.t1)
-1.26 -0.34 0.1 0.48 0.91 0.81 0.83 0.59 0.16 0.31 0.3 -0.07 -1.12 -1.72 -1.23 -1.88 -0.57 -0.35 -0.3 -0.15 -3.75 0.27 0.89 -0.12 0.21 0.05
Cpa|evm.model.tig00021073.17 (tig00021073_g18020.t1)
-0.33 0.09 0.04 0.37 0.54 0.58 0.32 0.32 0.08 0.15 0.17 0.04 -0.19 -1.21 -1.0 -1.37 -0.18 -0.24 -0.05 -0.28 -3.31 -0.09 0.72 0.2 0.61 -0.06
Cpa|evm.model.tig00021168.49 (tig00021168_g19118.t1)
-0.26 0.03 -0.12 0.28 0.34 0.52 0.28 0.51 0.58 0.42 0.1 0.07 -0.17 -0.49 -0.54 -0.81 -0.68 0.21 -0.06 -0.51 -3.99 -0.3 0.41 -0.6 0.42 0.26
Cpa|evm.model.tig00021221.8 (tig00021221_g19349.t1)
-1.02 -0.78 -1.04 -0.2 0.81 0.96 1.12 0.56 0.42 0.37 0.08 -0.32 -1.69 -0.83 -2.67 -1.76 -0.87 0.04 -0.16 0.04 -2.94 -0.47 0.88 0.2 0.61 0.61
Cpa|evm.model.tig00021348.34 (tig00021348_g20537.t1)
-1.78 -1.47 -0.95 -0.35 0.12 0.77 1.34 1.04 1.01 -0.04 -0.25 -0.91 -1.88 -1.69 -0.32 0.05 -0.05 0.15 0.17 0.03 -1.8 -1.03 1.14 -0.16 0.25 -0.76
Cpa|evm.model.tig00021493.14 (tig00021493_g21857.t1)
-2.47 -1.25 -0.28 0.41 0.95 1.33 1.27 0.98 0.78 0.13 -0.19 -0.86 -2.28 -2.13 -1.15 -0.49 -0.26 0.2 0.3 -0.38 -4.73 -0.82 0.29 0.18 0.13 -0.84
Cpa|evm.model.tig00021521.26 (tig00021521_g22092.t1)
-0.81 0.18 0.32 0.37 0.19 0.26 0.24 0.4 0.66 0.55 0.58 0.55 -0.25 -1.1 -0.95 -0.94 -0.55 -0.22 -0.04 -0.49 -2.29 0.14 0.76 -0.14 -0.46 -0.52

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.