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  5. Transcript_contig_57434

Transcript_contig_57434 (57434)


Aliases : 57434

Description : Pyruvate kinase, barrel [Interproscan].


Gene families : OG_01_0001448 (OrthoFinder) Phylogenetic Tree(s): OG0001448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_57434
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cre02.g147900 30784934, PYK5 Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. indica 0.01 OrthoFinder
Cre06.g280950 30778515, PYK2 Pyruvate kinase 2, cytosolic OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cz04g17050.t1 No alias Pyruvate kinase, barrel; Pyruvate kinase, C-terminal... 0.04 OrthoFinder
Cz15g09100.t1 No alias Pyruvate kinase, barrel; Pyruvate kinase, C-terminal... 0.04 OrthoFinder
Dusal.0224s00010.1 33186474 Pyruvate kinase, C-terminal; Pyruvate kinase, barrel... 0.03 OrthoFinder
Dusal.1013s00004.1 33187809 Pyruvate kinase, C-terminal; Pyruvate kinase, barrel... 0.02 OrthoFinder
Transcript_contig_56038 56038 Pyruvate kinase, C-terminal; Pyruvate kinase, barrel... 0.02 OrthoFinder
Vocar.0002s0096.1 32890877 Pyruvate kinase, barrel; Pyruvate kinase, C-terminal... 0.02 OrthoFinder
Vocar.0044s0014.1 32896615 Pyruvate kinase, C-terminal; Pyruvate kinase, barrel... 0.03 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57773.1_8484 PRW57773 Pyruvate kinase isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0004743 pyruvate kinase activity IEA Interproscan
BP GO:0006096 glycolytic process IEA Interproscan
MF GO:0030955 potassium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR015793 Pyrv_Knase_brl 34 400
No external refs found!