Transcript_contig_57329 (57329)


Aliases : 57329

Description : HECT domain [Interproscan].


Gene families : OG_01_0001795 (OrthoFinder) Phylogenetic Tree(s): OG0001795_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_57329
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
Vocar.0003s0039.1 32889238 HECT domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34081.1_3086 PRW34081 E3 ubiquitin-ligase UPL3-like 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496494.1_223 KAA8496494 E3 ubiquitin-protein ligase UPL3 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000569 HECT_dom 441 767
No external refs found!