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Transcript_contig_54213 (54213)


Aliases : 54213

Description : Aminotransferase class-III [Interproscan].


Gene families : OG_01_0001271 (OrthoFinder) Phylogenetic Tree(s): OG0001271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54213
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Cre03.g158000 30786587, GSA1 Coenzyme metabolism.tetrapyrrol... 0.01 OrthoFinder
Cz11g23070.t1 No alias Aminotransferase class-III [Interproscan]. 0.01 OrthoFinder
EOD13875 No alias Glutamate 1-semialdehyde 2,1-aminomutase [Ensembl]. 0.05 OrthoFinder
OT_20G00080.1 No alias Aminotransferase class-III [Interproscan]. 0.02 OrthoFinder
PTI_10G00960.1 No alias Aminotransferase class-III [Interproscan]. 0.01 OrthoFinder
Sro1597_g284880.1 Contig93.g1079 Glutamate-1-semialdehyde 2,1-aminomutase 0.01 OrthoFinder
Sro479_g151140.1 Contig1858.g16249 Glutamate-1-semialdehyde 2,1-aminomutase 0.01 OrthoFinder
SymbC1.scaffold4424.2 4424.2 Aminotransferase class-III [Interproscan]. 0.04 OrthoFinder
TP07G02510.1 No alias Aminotransferase class-III [Interproscan]. 0.02 OrthoFinder
Vocar.0019s0198.1 32892853 Aminotransferase class-III [Interproscan]. 0.01 OrthoFinder
XM_002508313.1 MICPUN_61667, 61667 Glutamate-1-semialdehyde 2,1-aminomutase (HEML) 0.01 OrthoFinder
lcl|BLLF01004474.1_cds_GFH29687.1_24164 HaLaN_28387, GFH29687 Glutamate-1-semialdehyde aminotransferase 0.04 OrthoFinder
lcl|BLLF01006299.1_cds_GFH32141.1_26618 HaLaN_31310, GFH32141 Glutamate-1-semialdehyde aminotransferase 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498009.1_6962 KAA8498009 Glutamate-1-semialdehyde 2,1-aminomutase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR005814 Aminotrans_3 74 383
No external refs found!