1. Home
  2. Species
  3. Chlorella vulgaris
  4. Sequence
  5. Transcript_contig_54034

Transcript_contig_54034 (54034)


Aliases : 54034

Description : Pentacotripeptide-repeat region of PRORP; Pentatricopeptide repeat [Interproscan].


Gene families : OG_01_0004506 (OrthoFinder) Phylogenetic Tree(s): OG0004506_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54034
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Cre10.g437150 30790568 Pentatricopeptide repeat-containing protein At5g02860... 0.01 OrthoFinder
Cz15g00060.t1 No alias Pentacotripeptide-repeat region of PRORP;... 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59967.1_6674 PRW59967 Pentatricopeptide repeat-containing 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 436 494
IPR002885 Pentatricopeptide_repeat 506 566
IPR033443 PPR_long 277 430
No external refs found!