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  5. lcl|LHPG02000023.1_cds_PRW20526.1_5410

lcl|LHPG02000023.1_cds_PRW20526.1_5410 (PRW20526)


Aliases : PRW20526

Description : Pyruvate carboxylase isoform B


Gene families : OG_01_0000176 (OrthoFinder) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000023.1_cds_PRW20526.1_5410
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Dusal.0200s00015.1 33197052 Carbamoyl-phosphate synthetase large subunit-like,... 0.02 OrthoFinder
SymbC1.scaffold4.1639 4.1639 RNA polymerase sigma factor 54 interaction domain;... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004650 polygalacturonase activity IEP Enrichment
MF GO:0004864 protein phosphatase inhibitor activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006955 immune response IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009617 response to bacterium IEP Enrichment
BP GO:0009620 response to fungus IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0019208 phosphatase regulator activity IEP Enrichment
MF GO:0019212 phosphatase inhibitor activity IEP Enrichment
BP GO:0019220 regulation of phosphate metabolic process IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0031399 regulation of protein modification process IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
BP GO:0042742 defense response to bacterium IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Enrichment
BP GO:0050832 defense response to fungus IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051174 regulation of phosphorus metabolic process IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0098542 defense response to other organism IEP Enrichment
InterPro domains Description Start Stop
IPR005482 Biotin_COase_C 709 816
IPR000537 UbiA_prenyltransferase 76 295
IPR000089 Biotin_lipoyl 1454 1519
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 471 691
IPR000891 PYR_CT 904 1173
IPR005481 BC-like_N 356 466
IPR003379 Carboxylase_cons_dom 1200 1399
No external refs found!