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  5. lcl|LHPG02000013.1_cds_PRW44359.1_2283

lcl|LHPG02000013.1_cds_PRW44359.1_2283 (PRW44359)


Aliases : PRW44359

Description : E3 ubiquitin-ligase UPL7


Gene families : OG_01_0000849 (OrthoFinder) Phylogenetic Tree(s): OG0000849_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000013.1_cds_PRW44359.1_2283
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Cz11g03050.t1 No alias HECT domain [Interproscan]. 0.02 OrthoFinder
Sro415_g138420.1 Contig3170.g25077 Probable E3 ubiquitin-protein ligase hulA 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006480 N-terminal protein amino acid methylation IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016843 amine-lyase activity IEP Enrichment
MF GO:0016844 strictosidine synthase activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR002893 Znf_MYND 2098 2121
IPR001810 F-box_dom 2512 2560
IPR001360 Glyco_hydro_1 997 1393
IPR000569 HECT_dom 678 987
No external refs found!