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  5. lcl|LHPG02000011.1_cds_PRW45423.1_1302

lcl|LHPG02000011.1_cds_PRW45423.1_1302 (PRW45423)


Aliases : PRW45423

Description : Carbohydrate-Binding Module Family 45


Gene families : OG_01_0000610 (OrthoFinder) Phylogenetic Tree(s): OG0000610_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000011.1_cds_PRW45423.1_1302
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000202.9 tig00000202_g16617.t1 Alpha-glucan water dikinase, chloroplastic OS=Solanum tuberosum 0.02 OrthoFinder
Cz09g00250.t1 No alias Pyruvate phosphate dikinase, AMP/ATP-binding [Interproscan]. 0.02 OrthoFinder
Dusal.0480s00002.1 33202056 Pyruvate phosphate dikinase, AMP/ATP-binding [Interproscan]. 0.03 OrthoFinder
OT_13G01480.1 No alias Pyruvate phosphate dikinase, AMP/ATP-binding [Interproscan]. 0.04 OrthoFinder
XM_003060175.1 MicpuC2_44532, 44532 Pyruvate phosphate dikinase, AMP/ATP-binding [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497249.1_978 KAA8497249 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
MF GO:0016301 kinase activity IEA Interproscan
BP GO:0016310 phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002192 PPDK_AMP/ATP-bd 776 966
IPR002782 Mut7-C_RNAse_dom 1322 1477
IPR002562 3'-5'_exonuclease_dom 1175 1303
No external refs found!