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  5. lcl|LHPG02000009.1_cds_PRW56046.1_9960

lcl|LHPG02000009.1_cds_PRW56046.1_9960 (PRW56046)


Aliases : PRW56046

Description : Multidrug resistance-associated 1 isoform X1


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000009.1_cds_PRW56046.1_9960
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.1 tig00000718_g3679.t1 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00000718.2 tig00000718_g3679.t1 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000718.3 tig00000718_g3679.t1 ABC transporter C family member 6 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000769.1 tig00000769_g3997.t1 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00001024.2 tig00001729_g9740.t1 ABC transporter C family member 14 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00001729.6 tig00001729_g9740.t1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cpa|evm.model.tig00020553.190 tig00020553_g10680.t1 ABC transporter C family member 4 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00020553.191 tig00020553_g10681.t1 ABC transporter C family member 11 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00020592.4 tig00020592_g11633.t1 ABC transporter C family member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre13.g564900 30784450, MRP3 Solute transport.primary active transport.ABC... 0.05 OrthoFinder
Cz05g17060.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
Cz10g17230.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Dusal.0432s00003.1 33197469 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
Dusal.0852s00004.1 33185428 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
EOD21422 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
OT_07G01620.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Sro1322_g262550.1 Contig3764.g28905 Multiple drug resistance-associated protein-like transporter 1 0.02 OrthoFinder
Sro399_g134960.1 Contig279.g3623 Multiple drug resistance-associated protein-like transporter 1 0.02 OrthoFinder
TP04G05700.1 No alias ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
lcl|BLLF01003175.1_cds_GFH26596.1_21073 HaLaN_24770, GFH26596 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005516 calmodulin binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1757 1905
IPR003439 ABC_transporter-like_ATP-bd 1029 1163
IPR011527 ABC1_TM_dom 1429 1674
IPR011527 ABC1_TM_dom 575 850
No external refs found!