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  5. lcl|LHPG02000008.1_cds_PRW56640.1_9912

lcl|LHPG02000008.1_cds_PRW56640.1_9912 (PRW56640)


Aliases : PRW56640

Description : ABC transporter D family member 1


Gene families : OG_01_0000221 (OrthoFinder) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000008.1_cds_PRW56640.1_9912
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Cz06g21170.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.04 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497386.1_1115 KAA8497386 ABC transporter D family member 2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
CC GO:0005801 cis-Golgi network IEP Enrichment
BP GO:0005985 sucrose metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
CC GO:0009317 acetyl-CoA carboxylase complex IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016157 sucrose synthase activity IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0031329 regulation of cellular catabolic process IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0043487 regulation of RNA stability IEP Enrichment
BP GO:0043488 regulation of mRNA stability IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0044528 regulation of mitochondrial mRNA stability IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0061013 regulation of mRNA catabolic process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
BP GO:1903311 regulation of mRNA metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 90 348
IPR011527 ABC1_TM_dom 731 978
IPR003439 ABC_transporter-like_ATP-bd 1094 1251
IPR003439 ABC_transporter-like_ATP-bd 452 601
No external refs found!