lcl|LHPG02000006.1_cds_PRW58060.1_8527 (PRW58060)

Aliases : PRW58060

Description : Ribonucleoside-diphosphate reductase small chain isoform A

Gene families : OG_01_0000968 (OrthoFinder) Phylogenetic Tree(s): OG0000968_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000006.1_cds_PRW58060.1_8527
Cluster	HCCA: Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000383.42	tig00000383_g24654.t1	Nucleotide metabolism.deoxynucleotide...	0.03	OrthoFinder
Cre12.g491050	30792193, RIR2	Nucleotide metabolism.deoxynucleotide...	0.04	OrthoFinder
Cz02g24230.t1	No alias	Ribonucleotide reductase small subunit family [Interproscan].	0.1	OrthoFinder
Dusal.0106s00020.1	33193472	Ribonucleotide reductase small subunit family [Interproscan].	0.04	OrthoFinder
Dusal.0106s00021.1	33193497	Ribonucleotide reductase small subunit family [Interproscan].	0.04	OrthoFinder
EOD10158	No alias	Ribonucleotide reductase small subunit family [Interproscan].	0.05	OrthoFinder
OT_08G00560.1	No alias	Ribonucleotide reductase small subunit family [Interproscan].	0.09	OrthoFinder
PTI_19G00790.1	No alias	Ribonucleotide reductase small subunit family [Interproscan].	0.05	OrthoFinder
Sro440_g143330.1	Contig2528.g20645	Ribonucleoside-diphosphate reductase small chain	0.02	OrthoFinder
TP03G00660.1	No alias	Ribonucleotide reductase small subunit family [Interproscan].	0.02	OrthoFinder
TP10G02960.1	No alias	Ribonucleotide reductase small subunit family [Interproscan].	0.05	OrthoFinder
Transcript_contig_53975	53975	Ribonucleotide reductase small subunit family [Interproscan].	0.01	OrthoFinder
Vocar.0031s0098.1	32890123	Ribonucleotide reductase small subunit family [Interproscan].	0.02	OrthoFinder
XM_002503333.1	MICPUN_94589, 94589	Ribonucleotide reductase small subunit family [Interproscan].	0.04	OrthoFinder
XM_003058319.1	MicpuC2_33344, 33344	Ribonucleotide reductase small subunit family [Interproscan].	0.03	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8498304.1_7257	KAA8498304	Ribonucleoside-diphosphate reductase small chain	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009262	deoxyribonucleotide metabolic process	None	Extended
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Enrichment
CC	GO:0000444	MIS12/MIND type complex	IEP	Enrichment
CC	GO:0000775	chromosome, centromeric region	IEP	Enrichment
CC	GO:0000776	kinetochore	IEP	Enrichment
CC	GO:0000786	nucleosome	IEP	Enrichment
CC	GO:0000796	condensin complex	IEP	Enrichment
CC	GO:0000818	nuclear MIS12/MIND complex	IEP	Enrichment
MF	GO:0003674	molecular_function	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003677	DNA binding	IEP	Enrichment
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0003777	microtubule motor activity	IEP	Enrichment
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0004100	chitin synthase activity	IEP	Enrichment
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Enrichment
MF	GO:0004222	metalloendopeptidase activity	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
CC	GO:0005575	cellular_component	IEP	Enrichment
CC	GO:0005694	chromosome	IEP	Enrichment
BP	GO:0006022	aminoglycan metabolic process	IEP	Enrichment
BP	GO:0006023	aminoglycan biosynthetic process	IEP	Enrichment
BP	GO:0006030	chitin metabolic process	IEP	Enrichment
BP	GO:0006031	chitin biosynthetic process	IEP	Enrichment
BP	GO:0006040	amino sugar metabolic process	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006270	DNA replication initiation	IEP	Enrichment
BP	GO:0006323	DNA packaging	IEP	Enrichment
BP	GO:0006334	nucleosome assembly	IEP	Enrichment
BP	GO:0006553	lysine metabolic process	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
BP	GO:0007017	microtubule-based process	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
BP	GO:0007059	chromosome segregation	IEP	Enrichment
BP	GO:0007076	mitotic chromosome condensation	IEP	Enrichment
MF	GO:0008017	microtubule binding	IEP	Enrichment
MF	GO:0008080	N-acetyltransferase activity	IEP	Enrichment
MF	GO:0008092	cytoskeletal protein binding	IEP	Enrichment
BP	GO:0008608	attachment of spindle microtubules to kinetochore	IEP	Enrichment
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Enrichment
MF	GO:0008837	diaminopimelate epimerase activity	IEP	Enrichment
MF	GO:0008942	nitrite reductase [NAD(P)H] activity	IEP	Enrichment
BP	GO:0009085	lysine biosynthetic process	IEP	Enrichment
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
BP	GO:0016043	cellular component organization	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016410	N-acyltransferase activity	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	Enrichment
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0016854	racemase and epimerase activity	IEP	Enrichment
MF	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
CC	GO:0018995	host cellular component	IEP	Enrichment
BP	GO:0022402	cell cycle process	IEP	Enrichment
BP	GO:0022414	reproductive process	IEP	Enrichment
BP	GO:0030261	chromosome condensation	IEP	Enrichment
MF	GO:0030554	adenyl nucleotide binding	IEP	Enrichment
CC	GO:0031262	Ndc80 complex	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Enrichment
CC	GO:0032991	protein-containing complex	IEP	Enrichment
CC	GO:0032993	protein-DNA complex	IEP	Enrichment
CC	GO:0033643	host cell part	IEP	Enrichment
CC	GO:0033646	host intracellular part	IEP	Enrichment
CC	GO:0033647	host intracellular organelle	IEP	Enrichment
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
MF	GO:0036094	small molecule binding	IEP	Enrichment
MF	GO:0036361	racemase activity, acting on amino acids and derivatives	IEP	Enrichment
CC	GO:0042025	host cell nucleus	IEP	Enrichment
MF	GO:0043015	gamma-tubulin binding	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043168	anion binding	IEP	Enrichment
CC	GO:0043228	non-membrane-bounded organelle	IEP	Enrichment
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Enrichment
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Enrichment
CC	GO:0044815	DNA packaging complex	IEP	Enrichment
BP	GO:0045132	meiotic chromosome segregation	IEP	Enrichment
BP	GO:0046349	amino sugar biosynthetic process	IEP	Enrichment
BP	GO:0046451	diaminopimelate metabolic process	IEP	Enrichment
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0047661	amino-acid racemase activity	IEP	Enrichment
BP	GO:0051276	chromosome organization	IEP	Enrichment
MF	GO:0051287	NAD binding	IEP	Enrichment
BP	GO:0051315	attachment of mitotic spindle microtubules to kinetochore	IEP	Enrichment
BP	GO:0065004	protein-DNA complex assembly	IEP	Enrichment
MF	GO:0070001	aspartic-type peptidase activity	IEP	Enrichment
BP	GO:0071840	cellular component organization or biogenesis	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment
CC	GO:0098687	chromosomal region	IEP	Enrichment
MF	GO:0098809	nitrite reductase activity	IEP	Enrichment
BP	GO:0098813	nuclear chromosome segregation	IEP	Enrichment
CC	GO:0099080	supramolecular complex	IEP	Enrichment
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Enrichment
BP	GO:1901073	glucosamine-containing compound biosynthetic process	IEP	Enrichment
MF	GO:1901265	nucleoside phosphate binding	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment
BP	GO:1903046	meiotic cell cycle process	IEP	Enrichment
BP	GO:1903047	mitotic cell cycle process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000358	RNR_small_fam	23	289

External Links

No external refs found!

lcl|LHPG02000006.1_cds_PRW58060.1_8527 (PRW58060)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation