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  5. lcl|LHPG02000002.1_cds_PRW60559.1_4125

lcl|LHPG02000002.1_cds_PRW60559.1_4125 (PRW60559)


Aliases : PRW60559

Description : Malate synthase A isoform A


Gene families : OG_01_0004035 (OrthoFinder) Phylogenetic Tree(s): OG0004035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000002.1_cds_PRW60559.1_4125
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Cre03.g144807 30786652, MAS1 Lipid metabolism.lipid degradation.fatty acid... 0.07 OrthoFinder
Cz14g25060.t1 No alias Malate synthase [Interproscan]. 0.05 OrthoFinder
PTI_08G01880.1 No alias Malate synthase [Interproscan]. 0.02 OrthoFinder
Sro868_g213270.1 Contig2961.g23529 Malate synthase 1, glyoxysomal 0.02 OrthoFinder
TP06G04590.1 No alias Malate synthase [Interproscan]. 0.03 OrthoFinder
Transcript_contig_68421 68421 Malate synthase [Interproscan]. 0.04 OrthoFinder
Transcript_contig_90358 90358 Malate synthase [Interproscan]. 0.03 OrthoFinder
Vocar.0014s0003.1 32888535 Malate synthase [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01002118.1_cds_GFH22763.1_17240 HaLaN_20275, GFH22763 Malate synthase 0.06 OrthoFinder
lcl|BLLF01002535.1_cds_GFH24432.1_18909 HaLaN_22228, GFH24432 Malate synthase 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004474 malate synthase activity IEA Interproscan
BP GO:0006097 glyoxylate cycle IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004451 isocitrate lyase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
BP GO:0006784 heme A biosynthetic process IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046160 heme a metabolic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR001465 Malate_synthase 16 537
No external refs found!