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  5. lcl|LHPG02000001.1_cds_PRW61038.1_93

lcl|LHPG02000001.1_cds_PRW61038.1_93 (PRW61038)


Aliases : PRW61038

Description : Multidrug resistance-associated 1 isoform X8


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000001.1_cds_PRW61038.1_93
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
EOD12092 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
TP07G05800.1 No alias ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
XM_003055793.1 MicpuC2_55005, 55005 ATP-binding cassette superfamily 0.02 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21108.1_4976 PRW21108 Multidrug resistance-associated 1 isoform X3 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0010024 phytochromobilin biosynthetic process IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
BP GO:0051202 phytochromobilin metabolic process IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1177 1326
IPR011527 ABC1_TM_dom 113 379
IPR011527 ABC1_TM_dom 843 1108
IPR003439 ABC_transporter-like_ATP-bd 443 577
No external refs found!