Cre13.g604150 (30784514)

Aliases : 30784514

Description : ABC transporter B family member 25, mitochondrial OS=Arabidopsis thaliana

Gene families : OG_01_0000325 (OrthoFinder) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre13.g604150
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021126.3	tig00021126_g18456.t1	ABC transporter B family member 24, mitochondrial...	0.03	OrthoFinder
Cz09g27180.t1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.05	OrthoFinder
Dusal.0084s00030.1	33201452	ABC transporter-like; ABC transporter type 1,...	0.04	OrthoFinder
OT_13G00820.1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.04	OrthoFinder
Sro2147_g316480.1	Contig4426.g33223	Lactococcin-G-processing and transport ATP-binding protein LagD	0.02	OrthoFinder
Sro2668_g334200.1	Contig4265.g32274	Lactococcin-G-processing and transport ATP-binding protein LagD	0.03	OrthoFinder
Transcript_contig_54542	54542	ABC transporter type 1, transmembrane domain; ABC...	0.01	OrthoFinder
Transcript_contig_67533	67533	ABC transporter-like [Interproscan].	0.03	OrthoFinder
lcl\|VRMN01000009.1_cds_KAA8492609.1_9302	KAA8492609	ABC transporter B family member 25	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0010181	FMN binding	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0051536	iron-sulfur cluster binding	IEP	Enrichment
MF	GO:0051540	metal cluster binding	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	160	427
IPR003439	ABC_transporter-like_ATP-bd	567	775

External Links

No external refs found!

Cre13.g604150 (30784514)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation