Cre11.g467654 (30775609)


Aliases : 30775609

Description : Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 OS=Arabidopsis thaliana


Gene families : OG_01_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre11.g467654
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Dusal.0244s00011.1 33186504 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.03 OrthoFinder
Dusal.0426s00003.1 33189094 Helicase-associated domain; Helicase, C-terminal; Domain... 0.03 OrthoFinder
EOD29635 No alias ATP-dependent RNA helicase [Ensembl]. 0.01 OrthoFinder
PTI_07G04380.1 No alias Helicase, C-terminal; Domain of unknown function... 0.02 OrthoFinder
Sro1496_g277510.1 Contig2419.g19801 Splicing factor ATP-dependent RNA helicase 0.02 OrthoFinder
Sro657_g182550.1 Contig301.g3975 Splicing factor ATP-dependent RNA helicase-like protein cdc28 0.01 OrthoFinder
Vocar.0005s0040.1 32884011 Helicase-associated domain; Domain of unknown function... 0.03 OrthoFinder
Vocar.0009s0344.1 32893201 Domain of unknown function DUF1605; Helicase-associated... 0.02 OrthoFinder
lcl|BLLF01005212.1_cds_GFH30884.1_25361 HaLaN_29814, GFH30884 RNA helicase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 363 491
IPR003593 AAA+_ATPase 138 255
IPR007502 Helicase-assoc_dom 569 643
No external refs found!