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Aliases : 30775609
Description : Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 OS=Arabidopsis thaliana
Gene families : OG_01_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre11.g467654 | |
| Cluster | HCCA: Cluster_145 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Dusal.0244s00011.1 | 33186504 | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.03 | OrthoFinder | |
| Dusal.0426s00003.1 | 33189094 | Helicase-associated domain; Helicase, C-terminal; Domain... | 0.03 | OrthoFinder | |
| EOD29635 | No alias | ATP-dependent RNA helicase [Ensembl]. | 0.01 | OrthoFinder | |
| PTI_07G04380.1 | No alias | Helicase, C-terminal; Domain of unknown function... | 0.02 | OrthoFinder | |
| Sro1496_g277510.1 | Contig2419.g19801 | Splicing factor ATP-dependent RNA helicase | 0.02 | OrthoFinder | |
| Sro657_g182550.1 | Contig301.g3975 | Splicing factor ATP-dependent RNA helicase-like protein cdc28 | 0.01 | OrthoFinder | |
| Vocar.0005s0040.1 | 32884011 | Helicase-associated domain; Domain of unknown function... | 0.03 | OrthoFinder | |
| Vocar.0009s0344.1 | 32893201 | Domain of unknown function DUF1605; Helicase-associated... | 0.02 | OrthoFinder | |
| lcl|BLLF01005212.1_cds_GFH30884.1_25361 | HaLaN_29814, GFH30884 | RNA helicase | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | Enrichment |
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| MF | GO:0003747 | translation release factor activity | IEP | Enrichment |
| MF | GO:0004143 | diacylglycerol kinase activity | IEP | Enrichment |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Enrichment |
| MF | GO:0005244 | voltage-gated ion channel activity | IEP | Enrichment |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Enrichment |
| MF | GO:0005253 | anion channel activity | IEP | Enrichment |
| MF | GO:0005254 | chloride channel activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006415 | translational termination | IEP | Enrichment |
| BP | GO:0006464 | cellular protein modification process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006821 | chloride transport | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Enrichment |
| BP | GO:0007205 | protein kinase C-activating G protein-coupled receptor signaling pathway | IEP | Enrichment |
| MF | GO:0008079 | translation termination factor activity | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| BP | GO:0016567 | protein ubiquitination | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Enrichment |
| BP | GO:0022411 | cellular component disassembly | IEP | Enrichment |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Enrichment |
| BP | GO:0032200 | telomere organization | IEP | Enrichment |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Enrichment |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| BP | GO:0036211 | protein modification process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0043624 | cellular protein complex disassembly | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| No external refs found! |