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  5. Cre10.g465550

Cre10.g465550 (30790230, CLPD1)


Aliases : 30790230, CLPD1

Description : Chaperone protein ClpB2, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g465550
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Dusal.0238s00006.1 33193657 ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase,... 0.05 OrthoFinder
Dusal.1244s00001.1 33189049 ATPase, AAA-type, core; ClpA/ClpB, AAA lid domain; Clp... 0.02 OrthoFinder
EOD15994 No alias Hsp104 [Ensembl]. 0.02 OrthoFinder
OT_05G04800.1 No alias Clp ATPase, C-terminal; ClpA/ClpB, AAA lid domain;... 0.02 OrthoFinder
PTI_04G03480.1 No alias ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp... 0.02 OrthoFinder
Sro1170_g248780.1 Contig3531.g27307 Protein ClpB 0.02 OrthoFinder
SymbC1.scaffold1.256 1.256 Beta propeller domain-containing family; Dockerin type I... 0.02 OrthoFinder
SymbC1.scaffold685.19 685.19 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA... 0.02 OrthoFinder
Vocar.0029s0077.1 32887567 ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp,... 0.02 OrthoFinder
lcl|BLLF01001302.1_cds_GFH18442.1_12919 HaLaN_15252, GFH18442 ATPase, AAA-type, core; Clp ATPase, C-terminal [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57345.1_8975 PRW57345 ATP-dependent Clp protease ATP-binding subunit 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 666 853
IPR004176 Clp_R_dom 89 138
IPR004176 Clp_R_dom 167 213
IPR041546 ClpA/ClpB_AAA_lid 432 499
IPR019489 Clp_ATPase_C 860 934
IPR003959 ATPase_AAA_core 282 405
No external refs found!