1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre10.g433750

Cre10.g433750 (30790635, PAP1)


Aliases : 30790635, PAP1

Description : RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase


Gene families : OG_01_0002090 (OrthoFinder) Phylogenetic Tree(s): OG0002090_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g433750
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
OT_15G01740.1 No alias Polymerase, nucleotidyl transferase domain; Poly(A)... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004652 polynucleotide adenylyltransferase activity IEA Interproscan
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
BP GO:0043631 RNA polyadenylation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 74 129
IPR007010 PolA_pol_RNA-bd_dom 362 470
IPR007012 PolA_pol_cen_dom 13 358
No external refs found!