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  5. Cre07.g325761

Cre07.g325761 (30775279)


Aliases : 30775279

Description : ABC transporter C family member 2 OS=Arabidopsis thaliana


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre07.g325761
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.1 tig00000718_g3679.t1 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000718.2 tig00000718_g3679.t1 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020553.190 tig00020553_g10680.t1 ABC transporter C family member 4 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020553.191 tig00020553_g10681.t1 ABC transporter C family member 11 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020592.4 tig00020592_g11633.t1 ABC transporter C family member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz01g21250.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
Cz03g28180.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Cz05g17060.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
EOD08599 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
EOD33714 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
EOD37777 No alias Multidrug resistance-associated protein, ABC superfamily... 0.01 OrthoFinder
OT_07G01620.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
PTI_03G04630.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
Sro1659_g289200.1 Contig194.g2262 Oligomycin resistance ATP-dependent permease YOR1 0.02 OrthoFinder
Sro1659_g289240.1 Contig194.g2266 Oligomycin resistance ATP-dependent permease YOR1 0.01 OrthoFinder
Sro2938_g340630.1 Contig1091.g10559 Oligomycin resistance ATP-dependent permease YOR1 0.02 OrthoFinder
Sro983_g227840.1 Contig79.g823 Multiple drug resistance-associated protein-like transporter 1 0.02 OrthoFinder
Transcript_contig_54369 54369 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Transcript_contig_55599 55599 ABC transporter type 1, transmembrane domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56264 56264 ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
Transcript_contig_56405 56405 ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
lcl|BLLF01000878.1_cds_GFH15645.1_10122 HaLaN_11906, GFH15645 ABC transporter-like [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0008987 quinolinate synthetase A activity IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1085 1151
IPR011527 ABC1_TM_dom 167 409
IPR003439 ABC_transporter-like_ATP-bd 671 836
No external refs found!