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  5. Cre02.g078966

Cre02.g078966 (30784942)


Aliases : 30784942

Description : ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g078966
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cz05g33210.t1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.04 OrthoFinder
OT_09G02830.1 No alias Peptidase M41 [Interproscan]. 0.01 OrthoFinder
Transcript_contig_54241 54241 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.01 OrthoFinder
XM_003062966.1 MicpuC2_29396, 29396 ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60935.1_747 PRW60935 ATP-dependent zinc metalloprotease chloroplastic isoform B 0.03 OrthoFinder
lcl|LHPG02000010.1_cds_PRW51101.1_1066 PRW51101 ATP-dependent zinc metalloprotease FTSH chloroplastic isoform A 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW33078.1_3788 PRW33078 ATP-dependent zinc metalloprotease 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 645 688
IPR000642 Peptidase_M41 705 894
IPR003959 ATPase_AAA_core 457 620
No external refs found!