Cre01.g021150 (30789613, TMU1)

Aliases : 30789613, TMU1

No description available

Gene families : OG_01_0001532 (OrthoFinder) Phylogenetic Tree(s): OG0001532_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Cre01.g021150
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Cz07g11240.t1 No alias (Uracil-5)-methyltransferase family [Interproscan]. 0.08 OrthoFinder
Dusal.0395s00009.1 33190049 (Uracil-5)-methyltransferase family [Interproscan]. 0.03 OrthoFinder
EOD35472 No alias (Uracil-5)-methyltransferase family [Interproscan]. 0.01 OrthoFinder
OT_03G02640.1 No alias (Uracil-5)-methyltransferase family [Interproscan]. 0.03 OrthoFinder
Transcript_contig_55455 55455 (Uracil-5)-methyltransferase family [Interproscan]. 0.02 OrthoFinder
Vocar.0045s0014.1 32887783 (Uracil-5)-methyltransferase family [Interproscan]. 0.04 OrthoFinder
XM_002501229.1 MICPUN_57633, 57633 (Uracil-5)-methyltransferase family [Interproscan]. 0.07 OrthoFinder
XM_003062310.1 MicpuC2_29176, 29176 (Uracil-5)-methyltransferase family [Interproscan]. 0.07 OrthoFinder
lcl|BLLF01000626.1_cds_GFH13555.1_8032 HaLaN_09462, GFH13555 TRNA (uracil-5-)-methyltransferase 0.04 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56534.1_9717 PRW56534 TRNA (uracil-5-)-methyltransferase 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0008173 RNA methyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0036265 RNA (guanine-N7)-methylation IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR010280 U5_MeTrfase_fam 176 321
IPR010280 U5_MeTrfase_fam 29 93
IPR010280 U5_MeTrfase_fam 357 519
No external refs found!